Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.87■□□□□ 0.93
TUBA1CQ9BQE3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
TUBA1CQ9BQE3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.87■□□□□ 0.93
TUBA1CQ9BQE3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TUBA1CQ9BQE3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TUBA1CQ9BQE3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBA1CQ9BQE3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TUBA1CQ9BQE3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBA1CQ9BQE3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.86■□□□□ 0.93
TUBA1CQ9BQE3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.86■□□□□ 0.93
TUBA1CQ9BQE3 MTDHP2-201ENST00000601468 714 ntBASIC20.86■□□□□ 0.93
TUBA1CQ9BQE3 AC010997.5-201ENST00000609182 354 ntBASIC20.86■□□□□ 0.93
TUBA1CQ9BQE3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.86■□□□□ 0.93
TUBA1CQ9BQE3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TUBA1CQ9BQE3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBA1CQ9BQE3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TUBA1CQ9BQE3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.86■□□□□ 0.93
TUBA1CQ9BQE3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 AC242852.2-201ENST00000615738 1807 ntBASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBA1CQ9BQE3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TUBA1CQ9BQE3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TUBA1CQ9BQE3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TUBA1CQ9BQE3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TUBA1CQ9BQE3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.84■□□□□ 0.93
TUBA1CQ9BQE3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.84■□□□□ 0.93
TUBA1CQ9BQE3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TUBA1CQ9BQE3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TUBA1CQ9BQE3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.84■□□□□ 0.93
TUBA1CQ9BQE3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TUBA1CQ9BQE3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TUBA1CQ9BQE3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.83■□□□□ 0.93
TUBA1CQ9BQE3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TUBA1CQ9BQE3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TUBA1CQ9BQE3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TUBA1CQ9BQE3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TUBA1CQ9BQE3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.83■□□□□ 0.93
TUBA1CQ9BQE3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.83■□□□□ 0.93
TUBA1CQ9BQE3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
TUBA1CQ9BQE3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.83■□□□□ 0.92
TUBA1CQ9BQE3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TUBA1CQ9BQE3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TUBA1CQ9BQE3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TUBA1CQ9BQE3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TUBA1CQ9BQE3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.82■□□□□ 0.92
TUBA1CQ9BQE3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TUBA1CQ9BQE3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TUBA1CQ9BQE3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TUBA1CQ9BQE3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.82■□□□□ 0.92
TUBA1CQ9BQE3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TUBA1CQ9BQE3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TUBA1CQ9BQE3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.82■□□□□ 0.92
TUBA1CQ9BQE3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TUBA1CQ9BQE3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TUBA1CQ9BQE3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TUBA1CQ9BQE3 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.81■□□□□ 0.92
TUBA1CQ9BQE3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.81■□□□□ 0.92
TUBA1CQ9BQE3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TUBA1CQ9BQE3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TUBA1CQ9BQE3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
TUBA1CQ9BQE3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TUBA1CQ9BQE3 AL121603.2-201ENST00000557373 2117 ntBASIC20.81■□□□□ 0.92
TUBA1CQ9BQE3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TUBA1CQ9BQE3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms