Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PKP2Q99959 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PKP2Q99959 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.92■□□□□ 0.94
PKP2Q99959 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.92■□□□□ 0.94
PKP2Q99959 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PKP2Q99959 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.92■□□□□ 0.94
PKP2Q99959 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PKP2Q99959 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.92■□□□□ 0.94
PKP2Q99959 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PKP2Q99959 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP2Q99959 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PKP2Q99959 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP2Q99959 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP2Q99959 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP2Q99959 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP2Q99959 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP2Q99959 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PKP2Q99959 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP2Q99959 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PKP2Q99959 AC026202.3-201ENST00000600805 1127 ntBASIC20.91■□□□□ 0.94
PKP2Q99959 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PKP2Q99959 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PKP2Q99959 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PKP2Q99959 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PKP2Q99959 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PKP2Q99959 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PKP2Q99959 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PKP2Q99959 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.9■□□□□ 0.94
PKP2Q99959 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PKP2Q99959 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PKP2Q99959 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PKP2Q99959 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PKP2Q99959 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PKP2Q99959 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PKP2Q99959 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
PKP2Q99959 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.89■□□□□ 0.94
PKP2Q99959 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PKP2Q99959 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PKP2Q99959 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PKP2Q99959 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.89■□□□□ 0.93
PKP2Q99959 AC010542.4-201ENST00000563151 1910 ntBASIC20.89■□□□□ 0.93
PKP2Q99959 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.89■□□□□ 0.93
PKP2Q99959 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PKP2Q99959 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PKP2Q99959 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PKP2Q99959 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.89■□□□□ 0.93
PKP2Q99959 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PKP2Q99959 AC087742.1-201ENST00000575880 1738 ntBASIC20.89■□□□□ 0.93
PKP2Q99959 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.89■□□□□ 0.93
PKP2Q99959 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
PKP2Q99959 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP2Q99959 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.88■□□□□ 0.93
PKP2Q99959 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PKP2Q99959 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.88■□□□□ 0.93
PKP2Q99959 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP2Q99959 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP2Q99959 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP2Q99959 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP2Q99959 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.88■□□□□ 0.93
PKP2Q99959 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP2Q99959 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PKP2Q99959 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP2Q99959 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.87■□□□□ 0.93
PKP2Q99959 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP2Q99959 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP2Q99959 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP2Q99959 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
PKP2Q99959 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.87■□□□□ 0.93
PKP2Q99959 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP2Q99959 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.87■□□□□ 0.93
PKP2Q99959 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PKP2Q99959 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP2Q99959 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.87■□□□□ 0.93
PKP2Q99959 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
PKP2Q99959 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP2Q99959 AL121603.2-201ENST00000557373 2117 ntBASIC20.86■□□□□ 0.93
PKP2Q99959 AC131274.2-201ENST00000580697 1507 ntBASIC20.86■□□□□ 0.93
PKP2Q99959 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PKP2Q99959 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP2Q99959 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.86■□□□□ 0.93
PKP2Q99959 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PKP2Q99959 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP2Q99959 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP2Q99959 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP2Q99959 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PKP2Q99959 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PKP2Q99959 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.85■□□□□ 0.93
PKP2Q99959 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP2Q99959 AC007029.1-201ENST00000604183 313 ntBASIC20.85■□□□□ 0.93
PKP2Q99959 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP2Q99959 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PKP2Q99959 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.84■□□□□ 0.93
PKP2Q99959 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PKP2Q99959 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PKP2Q99959 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.84■□□□□ 0.93
PKP2Q99959 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PKP2Q99959 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.84■□□□□ 0.93
PKP2Q99959 AL353803.4-201ENST00000565882 1934 ntBASIC20.84■□□□□ 0.93
PKP2Q99959 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PKP2Q99959 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms