Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HAPLN3Q96S86 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HAPLN3Q96S86 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HAPLN3Q96S86 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HAPLN3Q96S86 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.06■■□□□ 1.28
HAPLN3Q96S86 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.06■■□□□ 1.28
HAPLN3Q96S86 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
HAPLN3Q96S86 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.06■■□□□ 1.28
HAPLN3Q96S86 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.06■■□□□ 1.28
HAPLN3Q96S86 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HAPLN3Q96S86 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.06■■□□□ 1.28
HAPLN3Q96S86 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HAPLN3Q96S86 SYT6-210ENST00000641643 1587 ntBASIC23.06■■□□□ 1.28
HAPLN3Q96S86 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
HAPLN3Q96S86 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.05■■□□□ 1.28
HAPLN3Q96S86 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.05■■□□□ 1.28
HAPLN3Q96S86 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
HAPLN3Q96S86 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HAPLN3Q96S86 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
HAPLN3Q96S86 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.05■■□□□ 1.28
HAPLN3Q96S86 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HAPLN3Q96S86 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HAPLN3Q96S86 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.04■■□□□ 1.28
HAPLN3Q96S86 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HAPLN3Q96S86 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
HAPLN3Q96S86 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
HAPLN3Q96S86 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.04■■□□□ 1.28
HAPLN3Q96S86 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.04■■□□□ 1.28
HAPLN3Q96S86 AL138724.1-201ENST00000606771 1088 ntBASIC23.04■■□□□ 1.28
HAPLN3Q96S86 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HAPLN3Q96S86 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HAPLN3Q96S86 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HAPLN3Q96S86 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HAPLN3Q96S86 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
HAPLN3Q96S86 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.03■■□□□ 1.28
HAPLN3Q96S86 MIR3181-201ENST00000578512 73 ntBASIC23.03■■□□□ 1.28
HAPLN3Q96S86 pRNA.6-201ENST00000610482 90 ntBASIC23.03■■□□□ 1.28
HAPLN3Q96S86 pRNA.5-201ENST00000612139 90 ntBASIC23.03■■□□□ 1.28
HAPLN3Q96S86 pRNA.11-201ENST00000618423 90 ntBASIC23.03■■□□□ 1.28
HAPLN3Q96S86 pRNA.13-201ENST00000619112 90 ntBASIC23.03■■□□□ 1.28
HAPLN3Q96S86 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HAPLN3Q96S86 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
HAPLN3Q96S86 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HAPLN3Q96S86 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.03■■□□□ 1.28
HAPLN3Q96S86 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.02■■□□□ 1.28
HAPLN3Q96S86 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
HAPLN3Q96S86 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
HAPLN3Q96S86 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HAPLN3Q96S86 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.02■■□□□ 1.28
HAPLN3Q96S86 SERBP1P1-201ENST00000396021 1160 ntBASIC23.02■■□□□ 1.28
HAPLN3Q96S86 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.02■■□□□ 1.28
HAPLN3Q96S86 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
HAPLN3Q96S86 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.02■■□□□ 1.28
HAPLN3Q96S86 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HAPLN3Q96S86 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.02■■□□□ 1.28
HAPLN3Q96S86 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HAPLN3Q96S86 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HAPLN3Q96S86 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HAPLN3Q96S86 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.01■■□□□ 1.27
HAPLN3Q96S86 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HAPLN3Q96S86 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HAPLN3Q96S86 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.01■■□□□ 1.27
HAPLN3Q96S86 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HAPLN3Q96S86 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.01■■□□□ 1.27
HAPLN3Q96S86 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HAPLN3Q96S86 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
HAPLN3Q96S86 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HAPLN3Q96S86 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HAPLN3Q96S86 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HAPLN3Q96S86 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HAPLN3Q96S86 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
HAPLN3Q96S86 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23■■□□□ 1.27
HAPLN3Q96S86 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HAPLN3Q96S86 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HAPLN3Q96S86 UNC93B3-201ENST00000308076 687 ntBASIC23■■□□□ 1.27
HAPLN3Q96S86 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HAPLN3Q96S86 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HAPLN3Q96S86 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23■■□□□ 1.27
HAPLN3Q96S86 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23■■□□□ 1.27
HAPLN3Q96S86 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
HAPLN3Q96S86 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.99■■□□□ 1.27
HAPLN3Q96S86 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HAPLN3Q96S86 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.99■■□□□ 1.27
HAPLN3Q96S86 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.99■■□□□ 1.27
HAPLN3Q96S86 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
HAPLN3Q96S86 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.99■■□□□ 1.27
HAPLN3Q96S86 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HAPLN3Q96S86 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HAPLN3Q96S86 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.98■■□□□ 1.27
HAPLN3Q96S86 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
HAPLN3Q96S86 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HAPLN3Q96S86 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
HAPLN3Q96S86 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.98■■□□□ 1.27
HAPLN3Q96S86 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HAPLN3Q96S86 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.98■■□□□ 1.27
HAPLN3Q96S86 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.98■■□□□ 1.27
HAPLN3Q96S86 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
HAPLN3Q96S86 AC011298.3-201ENST00000615796 283 ntBASIC22.98■■□□□ 1.27
HAPLN3Q96S86 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HAPLN3Q96S86 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms