Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 AC092028.1-203ENST00000608262 953 ntBASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN4Q96NZ1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN4Q96NZ1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
FOXN4Q96NZ1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.86■□□□□ 0.77
FOXN4Q96NZ1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN4Q96NZ1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
FOXN4Q96NZ1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
FOXN4Q96NZ1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FOXN4Q96NZ1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN4Q96NZ1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN4Q96NZ1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
FOXN4Q96NZ1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN4Q96NZ1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN4Q96NZ1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN4Q96NZ1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
FOXN4Q96NZ1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.85■□□□□ 0.77
FOXN4Q96NZ1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
FOXN4Q96NZ1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN4Q96NZ1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXN4Q96NZ1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
FOXN4Q96NZ1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN4Q96NZ1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN4Q96NZ1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN4Q96NZ1 AC005703.6-201ENST00000623265 1329 ntBASIC19.84■□□□□ 0.77
FOXN4Q96NZ1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN4Q96NZ1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
FOXN4Q96NZ1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN4Q96NZ1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN4Q96NZ1 EP400NL-214ENST00000641289 2402 ntBASIC19.84■□□□□ 0.77
FOXN4Q96NZ1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN4Q96NZ1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
FOXN4Q96NZ1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN4Q96NZ1 AC019069.1-201ENST00000610008 1333 ntBASIC19.83■□□□□ 0.77
FOXN4Q96NZ1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN4Q96NZ1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN4Q96NZ1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN4Q96NZ1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN4Q96NZ1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FOXN4Q96NZ1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXN4Q96NZ1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN4Q96NZ1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN4Q96NZ1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN4Q96NZ1 MTDHP2-201ENST00000601468 714 ntBASIC19.82■□□□□ 0.76
FOXN4Q96NZ1 MIR6722-201ENST00000617286 78 ntBASIC19.82■□□□□ 0.76
FOXN4Q96NZ1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXN4Q96NZ1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN4Q96NZ1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN4Q96NZ1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN4Q96NZ1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN4Q96NZ1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
FOXN4Q96NZ1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN4Q96NZ1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN4Q96NZ1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN4Q96NZ1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
FOXN4Q96NZ1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.81■□□□□ 0.76
FOXN4Q96NZ1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.81■□□□□ 0.76
FOXN4Q96NZ1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
FOXN4Q96NZ1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXN4Q96NZ1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN4Q96NZ1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 AL117328.2-201ENST00000624617 1940 ntBASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN4Q96NZ1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN4Q96NZ1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN4Q96NZ1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
FOXN4Q96NZ1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN4Q96NZ1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
FOXN4Q96NZ1 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.79■□□□□ 0.76
FOXN4Q96NZ1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN4Q96NZ1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXN4Q96NZ1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXN4Q96NZ1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
FOXN4Q96NZ1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN4Q96NZ1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
FOXN4Q96NZ1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
FOXN4Q96NZ1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN4Q96NZ1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXN4Q96NZ1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms