Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CMTM3Q96MX0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CMTM3Q96MX0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CMTM3Q96MX0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.14■□□□□ 0.65
CMTM3Q96MX0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CMTM3Q96MX0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CMTM3Q96MX0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CMTM3Q96MX0 AC022413.1-201ENST00000624602 984 ntBASIC19.14■□□□□ 0.65
CMTM3Q96MX0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CMTM3Q96MX0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CMTM3Q96MX0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.14■□□□□ 0.65
CMTM3Q96MX0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CMTM3Q96MX0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CMTM3Q96MX0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CMTM3Q96MX0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CMTM3Q96MX0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.13■□□□□ 0.65
CMTM3Q96MX0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.13■□□□□ 0.65
CMTM3Q96MX0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CMTM3Q96MX0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CMTM3Q96MX0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CMTM3Q96MX0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CMTM3Q96MX0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.13■□□□□ 0.65
CMTM3Q96MX0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.13■□□□□ 0.65
CMTM3Q96MX0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CMTM3Q96MX0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CMTM3Q96MX0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CMTM3Q96MX0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CMTM3Q96MX0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CMTM3Q96MX0 FAM99A-202ENST00000538190 1989 ntBASIC19.12■□□□□ 0.65
CMTM3Q96MX0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CMTM3Q96MX0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.12■□□□□ 0.65
CMTM3Q96MX0 AC011551.1-201ENST00000614101 683 ntBASIC19.12■□□□□ 0.65
CMTM3Q96MX0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CMTM3Q96MX0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.11■□□□□ 0.65
CMTM3Q96MX0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CMTM3Q96MX0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CMTM3Q96MX0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CMTM3Q96MX0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CMTM3Q96MX0 AC010542.4-201ENST00000563151 1910 ntBASIC19.11■□□□□ 0.65
CMTM3Q96MX0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.11■□□□□ 0.65
CMTM3Q96MX0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.11■□□□□ 0.65
CMTM3Q96MX0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CMTM3Q96MX0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CMTM3Q96MX0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CMTM3Q96MX0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CMTM3Q96MX0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CMTM3Q96MX0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CMTM3Q96MX0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CMTM3Q96MX0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
CMTM3Q96MX0 AC087393.1-201ENST00000582896 145 ntBASIC19.1■□□□□ 0.65
CMTM3Q96MX0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.1■□□□□ 0.65
CMTM3Q96MX0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CMTM3Q96MX0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CMTM3Q96MX0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CMTM3Q96MX0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.09■□□□□ 0.65
CMTM3Q96MX0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CMTM3Q96MX0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.09■□□□□ 0.65
CMTM3Q96MX0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CMTM3Q96MX0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CMTM3Q96MX0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CMTM3Q96MX0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.09■□□□□ 0.65
CMTM3Q96MX0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CMTM3Q96MX0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CMTM3Q96MX0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.08■□□□□ 0.65
CMTM3Q96MX0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CMTM3Q96MX0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CMTM3Q96MX0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CMTM3Q96MX0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CMTM3Q96MX0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CMTM3Q96MX0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
CMTM3Q96MX0 MIR7108-201ENST00000614319 87 ntBASIC19.08■□□□□ 0.64
CMTM3Q96MX0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CMTM3Q96MX0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CMTM3Q96MX0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CMTM3Q96MX0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
CMTM3Q96MX0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CMTM3Q96MX0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CMTM3Q96MX0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CMTM3Q96MX0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.07■□□□□ 0.64
CMTM3Q96MX0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CMTM3Q96MX0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CMTM3Q96MX0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CMTM3Q96MX0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.07■□□□□ 0.64
CMTM3Q96MX0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CMTM3Q96MX0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CMTM3Q96MX0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CMTM3Q96MX0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CMTM3Q96MX0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CMTM3Q96MX0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.07■□□□□ 0.64
CMTM3Q96MX0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CMTM3Q96MX0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.06■□□□□ 0.64
CMTM3Q96MX0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CMTM3Q96MX0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CMTM3Q96MX0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.06■□□□□ 0.64
CMTM3Q96MX0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CMTM3Q96MX0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.06■□□□□ 0.64
CMTM3Q96MX0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CMTM3Q96MX0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
CMTM3Q96MX0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CMTM3Q96MX0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms