Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PRAC1Q96KF2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
PRAC1Q96KF2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PRAC1Q96KF2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PRAC1Q96KF2 WHAMMP3-201ENST00000611636 1609 ntBASIC10.94□□□□□ -0.66
PRAC1Q96KF2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PRAC1Q96KF2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PRAC1Q96KF2 AC096887.2-201ENST00000623443 1957 ntBASIC10.94□□□□□ -0.66
PRAC1Q96KF2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PRAC1Q96KF2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PRAC1Q96KF2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC10.94□□□□□ -0.66
PRAC1Q96KF2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 NOC2LP1-202ENST00000452600 2235 ntBASIC10.93□□□□□ -0.66
PRAC1Q96KF2 AC104581.1-202ENST00000635932 2618 ntBASIC10.93□□□□□ -0.66
PRAC1Q96KF2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PRAC1Q96KF2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC10.92□□□□□ -0.66
PRAC1Q96KF2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 AC008894.3-201ENST00000624324 3103 ntBASIC10.91□□□□□ -0.66
PRAC1Q96KF2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 GUSBP5-202ENST00000510805 1989 ntBASIC10.91□□□□□ -0.66
PRAC1Q96KF2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC10.91□□□□□ -0.66
PRAC1Q96KF2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 HCG11-201ENST00000411553 5696 ntBASIC10.9□□□□□ -0.66
PRAC1Q96KF2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC10.9□□□□□ -0.66
PRAC1Q96KF2 AC005332.8-201ENST00000622750 2735 ntBASIC10.9□□□□□ -0.66
PRAC1Q96KF2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
PRAC1Q96KF2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms