Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC58Q96CX6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC58Q96CX6 AC004448.1-201ENST00000458332 883 ntBASIC21.15■□□□□ 0.98
LRRC58Q96CX6 AC120024.1-201ENST00000562672 995 ntBASIC21.15■□□□□ 0.98
LRRC58Q96CX6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC58Q96CX6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC58Q96CX6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
LRRC58Q96CX6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC58Q96CX6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRRC58Q96CX6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC58Q96CX6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.14■□□□□ 0.97
LRRC58Q96CX6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC58Q96CX6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.14■□□□□ 0.97
LRRC58Q96CX6 AC087742.1-201ENST00000575880 1738 ntBASIC21.14■□□□□ 0.97
LRRC58Q96CX6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LRRC58Q96CX6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC58Q96CX6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.14■□□□□ 0.97
LRRC58Q96CX6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC58Q96CX6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC58Q96CX6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
LRRC58Q96CX6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC58Q96CX6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC58Q96CX6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.13■□□□□ 0.97
LRRC58Q96CX6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC58Q96CX6 KRT18P60-201ENST00000312876 1297 ntBASIC21.13■□□□□ 0.97
LRRC58Q96CX6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
LRRC58Q96CX6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LRRC58Q96CX6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC58Q96CX6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LRRC58Q96CX6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC58Q96CX6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC58Q96CX6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC58Q96CX6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC58Q96CX6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.12■□□□□ 0.97
LRRC58Q96CX6 RARRES2P2-201ENST00000394842 485 ntBASIC21.12■□□□□ 0.97
LRRC58Q96CX6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.12■□□□□ 0.97
LRRC58Q96CX6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC58Q96CX6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC58Q96CX6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.12■□□□□ 0.97
LRRC58Q96CX6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.12■□□□□ 0.97
LRRC58Q96CX6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC58Q96CX6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRC58Q96CX6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRC58Q96CX6 FBXW4P1-201ENST00000426721 2239 ntBASIC21.11■□□□□ 0.97
LRRC58Q96CX6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
LRRC58Q96CX6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
LRRC58Q96CX6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC58Q96CX6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRC58Q96CX6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
LRRC58Q96CX6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC58Q96CX6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC58Q96CX6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC58Q96CX6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRC58Q96CX6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC58Q96CX6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC58Q96CX6 AC139795.1-202ENST00000500444 432 ntBASIC21.1■□□□□ 0.97
LRRC58Q96CX6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC58Q96CX6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC58Q96CX6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRC58Q96CX6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LRRC58Q96CX6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC58Q96CX6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.09■□□□□ 0.97
LRRC58Q96CX6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC58Q96CX6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC58Q96CX6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC58Q96CX6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC58Q96CX6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.08■□□□□ 0.97
LRRC58Q96CX6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC58Q96CX6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC58Q96CX6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC58Q96CX6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC58Q96CX6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.08■□□□□ 0.97
LRRC58Q96CX6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC58Q96CX6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRRC58Q96CX6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.08■□□□□ 0.96
LRRC58Q96CX6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LRRC58Q96CX6 AL024507.2-201ENST00000606070 2574 ntBASIC21.07■□□□□ 0.96
LRRC58Q96CX6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.07■□□□□ 0.96
LRRC58Q96CX6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC58Q96CX6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC58Q96CX6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
LRRC58Q96CX6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC58Q96CX6 MIR4281-201ENST00000580852 62 ntBASIC21.07■□□□□ 0.96
LRRC58Q96CX6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.07■□□□□ 0.96
LRRC58Q96CX6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC58Q96CX6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC58Q96CX6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LRRC58Q96CX6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LRRC58Q96CX6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LRRC58Q96CX6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC58Q96CX6 KRT18P24-201ENST00000344739 1156 ntBASIC21.06■□□□□ 0.96
LRRC58Q96CX6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.06■□□□□ 0.96
LRRC58Q96CX6 AC144652.1-201ENST00000609974 1624 ntBASIC21.06■□□□□ 0.96
LRRC58Q96CX6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.06■□□□□ 0.96
LRRC58Q96CX6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LRRC58Q96CX6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LRRC58Q96CX6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC58Q96CX6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC58Q96CX6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC58Q96CX6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms