Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.29■■□□□ 1.32
RNF25Q96BH1 AC005703.6-201ENST00000623265 1329 ntBASIC23.29■■□□□ 1.32
RNF25Q96BH1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF25Q96BH1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF25Q96BH1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RNF25Q96BH1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF25Q96BH1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
RNF25Q96BH1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
RNF25Q96BH1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.28■■□□□ 1.32
RNF25Q96BH1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RNF25Q96BH1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.28■■□□□ 1.32
RNF25Q96BH1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.28■■□□□ 1.32
RNF25Q96BH1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF25Q96BH1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF25Q96BH1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.28■■□□□ 1.32
RNF25Q96BH1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF25Q96BH1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF25Q96BH1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF25Q96BH1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.27■■□□□ 1.32
RNF25Q96BH1 AC092028.1-203ENST00000608262 953 ntBASIC23.27■■□□□ 1.32
RNF25Q96BH1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RNF25Q96BH1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF25Q96BH1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RNF25Q96BH1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF25Q96BH1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
RNF25Q96BH1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RNF25Q96BH1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF25Q96BH1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF25Q96BH1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
RNF25Q96BH1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.26■■□□□ 1.31
RNF25Q96BH1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.26■■□□□ 1.31
RNF25Q96BH1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF25Q96BH1 AC144652.1-201ENST00000609974 1624 ntBASIC23.26■■□□□ 1.31
RNF25Q96BH1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF25Q96BH1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF25Q96BH1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.25■■□□□ 1.31
RNF25Q96BH1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF25Q96BH1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF25Q96BH1 KRT125P-201ENST00000546827 989 ntBASIC23.25■■□□□ 1.31
RNF25Q96BH1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF25Q96BH1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF25Q96BH1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF25Q96BH1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
RNF25Q96BH1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.25■■□□□ 1.31
RNF25Q96BH1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF25Q96BH1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF25Q96BH1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF25Q96BH1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.24■■□□□ 1.31
RNF25Q96BH1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF25Q96BH1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
RNF25Q96BH1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.24■■□□□ 1.31
RNF25Q96BH1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF25Q96BH1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF25Q96BH1 ECEL1P1-201ENST00000373592 1742 ntBASIC23.24■■□□□ 1.31
RNF25Q96BH1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.24■■□□□ 1.31
RNF25Q96BH1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RNF25Q96BH1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RNF25Q96BH1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.23■■□□□ 1.31
RNF25Q96BH1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.23■■□□□ 1.31
RNF25Q96BH1 AC239859.2-201ENST00000444165 318 ntBASIC23.23■■□□□ 1.31
RNF25Q96BH1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RNF25Q96BH1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.23■■□□□ 1.31
RNF25Q96BH1 MIR4787-201ENST00000607364 84 ntBASIC23.23■■□□□ 1.31
RNF25Q96BH1 AC012183.1-201ENST00000625197 499 ntBASIC23.23■■□□□ 1.31
RNF25Q96BH1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF25Q96BH1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.23■■□□□ 1.31
RNF25Q96BH1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF25Q96BH1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF25Q96BH1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
RNF25Q96BH1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RNF25Q96BH1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF25Q96BH1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF25Q96BH1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF25Q96BH1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
RNF25Q96BH1 Z92544.1-202ENST00000571933 1220 ntBASIC23.22■■□□□ 1.31
RNF25Q96BH1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF25Q96BH1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF25Q96BH1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF25Q96BH1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF25Q96BH1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RNF25Q96BH1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF25Q96BH1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF25Q96BH1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF25Q96BH1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF25Q96BH1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
RNF25Q96BH1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF25Q96BH1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF25Q96BH1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF25Q96BH1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
RNF25Q96BH1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF25Q96BH1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF25Q96BH1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF25Q96BH1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF25Q96BH1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF25Q96BH1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF25Q96BH1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF25Q96BH1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
RNF25Q96BH1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF25Q96BH1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF25Q96BH1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms