Protein–RNA interactions for Protein: Q92966

SNAPC3, snRNA-activating protein complex subunit 3, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3Q92966 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAPC3Q92966 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAPC3Q92966 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.2■□□□□ 0.66
SNAPC3Q92966 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.2■□□□□ 0.66
SNAPC3Q92966 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAPC3Q92966 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.2■□□□□ 0.66
SNAPC3Q92966 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.2■□□□□ 0.66
SNAPC3Q92966 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAPC3Q92966 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.19■□□□□ 0.66
SNAPC3Q92966 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.19■□□□□ 0.66
SNAPC3Q92966 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.19■□□□□ 0.66
SNAPC3Q92966 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAPC3Q92966 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNAPC3Q92966 AF106564.1-201ENST00000607058 2553 ntBASIC19.19■□□□□ 0.66
SNAPC3Q92966 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAPC3Q92966 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAPC3Q92966 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.19■□□□□ 0.66
SNAPC3Q92966 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.19■□□□□ 0.66
SNAPC3Q92966 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAPC3Q92966 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SNAPC3Q92966 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SNAPC3Q92966 AC090877.2-201ENST00000558441 1738 ntBASIC19.19■□□□□ 0.66
SNAPC3Q92966 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAPC3Q92966 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SNAPC3Q92966 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNAPC3Q92966 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAPC3Q92966 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SNAPC3Q92966 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNAPC3Q92966 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SNAPC3Q92966 AL161729.1-201ENST00000604104 1402 ntBASIC19.18■□□□□ 0.66
SNAPC3Q92966 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SNAPC3Q92966 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAPC3Q92966 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAPC3Q92966 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAPC3Q92966 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAPC3Q92966 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.18■□□□□ 0.66
SNAPC3Q92966 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.18■□□□□ 0.66
SNAPC3Q92966 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAPC3Q92966 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.18■□□□□ 0.66
SNAPC3Q92966 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNAPC3Q92966 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
SNAPC3Q92966 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAPC3Q92966 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNAPC3Q92966 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAPC3Q92966 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.17■□□□□ 0.66
SNAPC3Q92966 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.17■□□□□ 0.66
SNAPC3Q92966 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SNAPC3Q92966 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAPC3Q92966 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAPC3Q92966 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAPC3Q92966 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNAPC3Q92966 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAPC3Q92966 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNAPC3Q92966 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAPC3Q92966 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.16■□□□□ 0.66
SNAPC3Q92966 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAPC3Q92966 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAPC3Q92966 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAPC3Q92966 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
SNAPC3Q92966 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SNAPC3Q92966 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNAPC3Q92966 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.16■□□□□ 0.66
SNAPC3Q92966 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAPC3Q92966 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.16■□□□□ 0.66
SNAPC3Q92966 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.16■□□□□ 0.66
SNAPC3Q92966 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAPC3Q92966 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.15■□□□□ 0.66
SNAPC3Q92966 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNAPC3Q92966 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNAPC3Q92966 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNAPC3Q92966 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNAPC3Q92966 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNAPC3Q92966 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNAPC3Q92966 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.15■□□□□ 0.66
SNAPC3Q92966 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.15■□□□□ 0.66
SNAPC3Q92966 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNAPC3Q92966 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNAPC3Q92966 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SNAPC3Q92966 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNAPC3Q92966 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNAPC3Q92966 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNAPC3Q92966 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNAPC3Q92966 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNAPC3Q92966 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNAPC3Q92966 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNAPC3Q92966 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNAPC3Q92966 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.14■□□□□ 0.65
SNAPC3Q92966 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SNAPC3Q92966 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNAPC3Q92966 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.14■□□□□ 0.65
SNAPC3Q92966 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNAPC3Q92966 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.14■□□□□ 0.65
SNAPC3Q92966 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SNAPC3Q92966 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.14■□□□□ 0.65
SNAPC3Q92966 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAPC3Q92966 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAPC3Q92966 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAPC3Q92966 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAPC3Q92966 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNAPC3Q92966 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms