Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TTC9Q92623 AC141586.4-201ENST00000624558 1573 ntBASIC21.14■□□□□ 0.98
TTC9Q92623 ESRRAP2-201ENST00000418437 1549 ntBASIC21.14■□□□□ 0.98
TTC9Q92623 TSPY26P-201ENST00000476365 1326 ntBASIC21.14■□□□□ 0.97
TTC9Q92623 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TTC9Q92623 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC9Q92623 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC9Q92623 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.13■□□□□ 0.97
TTC9Q92623 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC9Q92623 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC9Q92623 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC9Q92623 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.13■□□□□ 0.97
TTC9Q92623 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.13■□□□□ 0.97
TTC9Q92623 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.13■□□□□ 0.97
TTC9Q92623 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TTC9Q92623 NTF6G-201ENST00000591094 616 ntBASIC21.13■□□□□ 0.97
TTC9Q92623 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TTC9Q92623 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TTC9Q92623 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.13■□□□□ 0.97
TTC9Q92623 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC9Q92623 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC9Q92623 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC9Q92623 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TTC9Q92623 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TTC9Q92623 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC9Q92623 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.12■□□□□ 0.97
TTC9Q92623 CCDC92B-201ENST00000575506 885 ntBASIC21.12■□□□□ 0.97
TTC9Q92623 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
TTC9Q92623 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.12■□□□□ 0.97
TTC9Q92623 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC9Q92623 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC9Q92623 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC9Q92623 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC9Q92623 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TTC9Q92623 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC9Q92623 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TTC9Q92623 AL139125.2-201ENST00000623134 1869 ntBASIC21.11■□□□□ 0.97
TTC9Q92623 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
TTC9Q92623 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC9Q92623 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC9Q92623 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.11■□□□□ 0.97
TTC9Q92623 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TTC9Q92623 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC9Q92623 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC9Q92623 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC9Q92623 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.11■□□□□ 0.97
TTC9Q92623 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TTC9Q92623 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC9Q92623 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC9Q92623 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC9Q92623 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC9Q92623 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC9Q92623 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC9Q92623 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TTC9Q92623 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC9Q92623 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC9Q92623 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC9Q92623 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
TTC9Q92623 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC9Q92623 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.1■□□□□ 0.97
TTC9Q92623 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.1■□□□□ 0.97
TTC9Q92623 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.1■□□□□ 0.97
TTC9Q92623 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC9Q92623 AC009086.3-201ENST00000623486 1008 ntBASIC21.1■□□□□ 0.97
TTC9Q92623 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC9Q92623 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC9Q92623 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC9Q92623 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.1■□□□□ 0.97
TTC9Q92623 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC9Q92623 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC9Q92623 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC9Q92623 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.09■□□□□ 0.97
TTC9Q92623 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.09■□□□□ 0.97
TTC9Q92623 ABHD17AP1-201ENST00000358206 933 ntBASIC21.09■□□□□ 0.97
TTC9Q92623 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC9Q92623 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.09■□□□□ 0.97
TTC9Q92623 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC9Q92623 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TTC9Q92623 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC9Q92623 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
TTC9Q92623 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TTC9Q92623 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC9Q92623 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.08■□□□□ 0.97
TTC9Q92623 MIR6084-201ENST00000622012 110 ntBASIC21.08■□□□□ 0.97
TTC9Q92623 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
TTC9Q92623 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC9Q92623 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TTC9Q92623 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC9Q92623 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC9Q92623 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.07■□□□□ 0.96
TTC9Q92623 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.07■□□□□ 0.96
TTC9Q92623 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TTC9Q92623 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.07■□□□□ 0.96
TTC9Q92623 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TTC9Q92623 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC9Q92623 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TTC9Q92623 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TTC9Q92623 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.07■□□□□ 0.96
TTC9Q92623 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TTC9Q92623 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms