Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX1Q92499 LINC01529-204ENST00000636474 1715 ntBASIC23.75■■□□□ 1.39
DDX1Q92499 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX1Q92499 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.75■■□□□ 1.39
DDX1Q92499 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX1Q92499 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
DDX1Q92499 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DDX1Q92499 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.74■■□□□ 1.39
DDX1Q92499 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX1Q92499 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX1Q92499 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX1Q92499 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX1Q92499 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX1Q92499 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX1Q92499 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.74■■□□□ 1.39
DDX1Q92499 C17orf82-201ENST00000623772 1530 ntBASIC23.74■■□□□ 1.39
DDX1Q92499 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DDX1Q92499 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX1Q92499 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX1Q92499 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.73■■□□□ 1.39
DDX1Q92499 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX1Q92499 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.73■■□□□ 1.39
DDX1Q92499 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX1Q92499 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX1Q92499 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX1Q92499 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX1Q92499 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX1Q92499 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX1Q92499 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.72■■□□□ 1.39
DDX1Q92499 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.72■■□□□ 1.39
DDX1Q92499 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.72■■□□□ 1.39
DDX1Q92499 MIR5787-201ENST00000611784 55 ntBASIC23.72■■□□□ 1.39
DDX1Q92499 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX1Q92499 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.72■■□□□ 1.39
DDX1Q92499 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
DDX1Q92499 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX1Q92499 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX1Q92499 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.71■■□□□ 1.39
DDX1Q92499 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
DDX1Q92499 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX1Q92499 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
DDX1Q92499 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
DDX1Q92499 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.71■■□□□ 1.39
DDX1Q92499 DUX4L4-201ENST00000566884 1269 ntBASIC23.71■■□□□ 1.39
DDX1Q92499 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
DDX1Q92499 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
DDX1Q92499 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
DDX1Q92499 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
DDX1Q92499 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX1Q92499 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX1Q92499 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX1Q92499 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX1Q92499 MIR3621-201ENST00000580529 85 ntBASIC23.7■■□□□ 1.38
DDX1Q92499 AL117332.1-201ENST00000622628 974 ntBASIC23.7■■□□□ 1.38
DDX1Q92499 AC233723.2-201ENST00000623798 2106 ntBASIC23.7■■□□□ 1.38
DDX1Q92499 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.7■■□□□ 1.38
DDX1Q92499 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX1Q92499 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX1Q92499 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
DDX1Q92499 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX1Q92499 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX1Q92499 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX1Q92499 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.69■■□□□ 1.38
DDX1Q92499 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.69■■□□□ 1.38
DDX1Q92499 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX1Q92499 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX1Q92499 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX1Q92499 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX1Q92499 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX1Q92499 AL356740.2-201ENST00000601559 647 ntBASIC23.69■■□□□ 1.38
DDX1Q92499 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX1Q92499 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX1Q92499 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX1Q92499 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX1Q92499 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX1Q92499 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
DDX1Q92499 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX1Q92499 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX1Q92499 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX1Q92499 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.68■■□□□ 1.38
DDX1Q92499 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX1Q92499 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.68■■□□□ 1.38
DDX1Q92499 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX1Q92499 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
DDX1Q92499 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX1Q92499 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.68■■□□□ 1.38
DDX1Q92499 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX1Q92499 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX1Q92499 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
DDX1Q92499 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
DDX1Q92499 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX1Q92499 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
DDX1Q92499 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
DDX1Q92499 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
DDX1Q92499 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX1Q92499 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
DDX1Q92499 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
DDX1Q92499 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.67■■□□□ 1.38
DDX1Q92499 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
DDX1Q92499 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms