Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 OR2I1P-207ENST00000453522 948 ntBASIC20.27■□□□□ 0.84
RNF138Q8WVD3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 MIR4767-201ENST00000582827 78 ntBASIC20.27■□□□□ 0.84
RNF138Q8WVD3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF138Q8WVD3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF138Q8WVD3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.27■□□□□ 0.83
RNF138Q8WVD3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
RNF138Q8WVD3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF138Q8WVD3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF138Q8WVD3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF138Q8WVD3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
RNF138Q8WVD3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF138Q8WVD3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF138Q8WVD3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 PBX2P1-201ENST00000493219 1291 ntBASIC20.25■□□□□ 0.83
RNF138Q8WVD3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF138Q8WVD3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 EDA-201ENST00000338901 1233 ntBASIC20.24■□□□□ 0.83
RNF138Q8WVD3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF138Q8WVD3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF138Q8WVD3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF138Q8WVD3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF138Q8WVD3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF138Q8WVD3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RNF138Q8WVD3 MIR638-201ENST00000385237 100 ntBASIC20.23■□□□□ 0.83
RNF138Q8WVD3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF138Q8WVD3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF138Q8WVD3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF138Q8WVD3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
RNF138Q8WVD3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF138Q8WVD3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RNF138Q8WVD3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RNF138Q8WVD3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF138Q8WVD3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF138Q8WVD3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.22■□□□□ 0.83
RNF138Q8WVD3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.22■□□□□ 0.83
RNF138Q8WVD3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF138Q8WVD3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF138Q8WVD3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RNF138Q8WVD3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF138Q8WVD3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF138Q8WVD3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF138Q8WVD3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF138Q8WVD3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RNF138Q8WVD3 SUDS3P1-201ENST00000505831 966 ntBASIC20.21■□□□□ 0.83
RNF138Q8WVD3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
RNF138Q8WVD3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF138Q8WVD3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RNF138Q8WVD3 AC004687.1-201ENST00000579003 1625 ntBASIC20.2■□□□□ 0.82
RNF138Q8WVD3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
RNF138Q8WVD3 BX842568.3-201ENST00000418104 571 ntBASIC20.2■□□□□ 0.82
RNF138Q8WVD3 AP001330.3-201ENST00000520123 633 ntBASIC20.2■□□□□ 0.82
RNF138Q8WVD3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RNF138Q8WVD3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF138Q8WVD3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF138Q8WVD3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF138Q8WVD3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RNF138Q8WVD3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF138Q8WVD3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RNF138Q8WVD3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF138Q8WVD3 AL355001.2-201ENST00000620617 1191 ntBASIC20.19■□□□□ 0.82
RNF138Q8WVD3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF138Q8WVD3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF138Q8WVD3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF138Q8WVD3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms