Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
PTCD2Q8WV60 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCD2Q8WV60 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.5■■□□□ 1.19
PTCD2Q8WV60 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.49■■□□□ 1.19
PTCD2Q8WV60 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD2Q8WV60 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.49■■□□□ 1.19
PTCD2Q8WV60 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD2Q8WV60 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
PTCD2Q8WV60 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD2Q8WV60 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PTCD2Q8WV60 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PTCD2Q8WV60 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD2Q8WV60 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD2Q8WV60 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
PTCD2Q8WV60 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD2Q8WV60 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD2Q8WV60 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.48■■□□□ 1.19
PTCD2Q8WV60 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.48■■□□□ 1.19
PTCD2Q8WV60 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD2Q8WV60 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD2Q8WV60 AC079416.2-201ENST00000625035 1193 ntBASIC22.48■■□□□ 1.19
PTCD2Q8WV60 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PTCD2Q8WV60 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD2Q8WV60 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.48■■□□□ 1.19
PTCD2Q8WV60 FP325331.1-202ENST00000623531 1380 ntBASIC22.48■■□□□ 1.19
PTCD2Q8WV60 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD2Q8WV60 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PTCD2Q8WV60 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCD2Q8WV60 AC110285.6-201ENST00000617652 491 ntBASIC22.47■■□□□ 1.19
PTCD2Q8WV60 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCD2Q8WV60 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PTCD2Q8WV60 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PTCD2Q8WV60 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PTCD2Q8WV60 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PTCD2Q8WV60 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.46■■□□□ 1.19
PTCD2Q8WV60 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.46■■□□□ 1.19
PTCD2Q8WV60 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCD2Q8WV60 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
PTCD2Q8WV60 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCD2Q8WV60 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.46■■□□□ 1.19
PTCD2Q8WV60 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PTCD2Q8WV60 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PTCD2Q8WV60 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
PTCD2Q8WV60 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.45■■□□□ 1.19
PTCD2Q8WV60 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCD2Q8WV60 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PTCD2Q8WV60 AC096631.2-201ENST00000436136 790 ntBASIC22.45■■□□□ 1.18
PTCD2Q8WV60 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.45■■□□□ 1.18
PTCD2Q8WV60 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.45■■□□□ 1.18
PTCD2Q8WV60 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.45■■□□□ 1.18
PTCD2Q8WV60 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PTCD2Q8WV60 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.45■■□□□ 1.18
PTCD2Q8WV60 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.45■■□□□ 1.18
PTCD2Q8WV60 C1orf229-201ENST00000623686 2258 ntBASIC22.45■■□□□ 1.18
PTCD2Q8WV60 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PTCD2Q8WV60 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.44■■□□□ 1.18
PTCD2Q8WV60 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.44■■□□□ 1.18
PTCD2Q8WV60 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCD2Q8WV60 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
PTCD2Q8WV60 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.43■■□□□ 1.18
PTCD2Q8WV60 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCD2Q8WV60 LINC01529-204ENST00000636474 1715 ntBASIC22.43■■□□□ 1.18
PTCD2Q8WV60 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCD2Q8WV60 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.43■■□□□ 1.18
PTCD2Q8WV60 AC009102.2-201ENST00000606772 1639 ntBASIC22.43■■□□□ 1.18
PTCD2Q8WV60 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
PTCD2Q8WV60 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCD2Q8WV60 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCD2Q8WV60 ESRRAP2-201ENST00000418437 1549 ntBASIC22.42■■□□□ 1.18
PTCD2Q8WV60 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCD2Q8WV60 AC233723.2-201ENST00000623798 2106 ntBASIC22.42■■□□□ 1.18
PTCD2Q8WV60 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.42■■□□□ 1.18
PTCD2Q8WV60 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.42■■□□□ 1.18
PTCD2Q8WV60 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCD2Q8WV60 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.42■■□□□ 1.18
PTCD2Q8WV60 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PTCD2Q8WV60 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.41■■□□□ 1.18
PTCD2Q8WV60 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.41■■□□□ 1.18
PTCD2Q8WV60 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
PTCD2Q8WV60 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PTCD2Q8WV60 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.41■■□□□ 1.18
PTCD2Q8WV60 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
PTCD2Q8WV60 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
PTCD2Q8WV60 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PTCD2Q8WV60 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PTCD2Q8WV60 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PTCD2Q8WV60 AL117328.2-201ENST00000624617 1940 ntBASIC22.4■■□□□ 1.18
PTCD2Q8WV60 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
PTCD2Q8WV60 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.4■■□□□ 1.18
PTCD2Q8WV60 AL139246.5-201ENST00000606645 996 ntBASIC22.4■■□□□ 1.18
PTCD2Q8WV60 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.4■■□□□ 1.18
PTCD2Q8WV60 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PTCD2Q8WV60 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
PTCD2Q8WV60 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.39■■□□□ 1.18
PTCD2Q8WV60 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PTCD2Q8WV60 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
PTCD2Q8WV60 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PTCD2Q8WV60 MIR638-201ENST00000385237 100 ntBASIC22.39■■□□□ 1.17
PTCD2Q8WV60 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.39■■□□□ 1.17
PTCD2Q8WV60 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms