Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC27.43■■□□□ 1.98
SNED1Q8TER0 AC105233.4-201ENST00000642045 216 ntBASIC27.43■■□□□ 1.98
SNED1Q8TER0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNED1Q8TER0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNED1Q8TER0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNED1Q8TER0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
SNED1Q8TER0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNED1Q8TER0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC27.42■■□□□ 1.98
SNED1Q8TER0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNED1Q8TER0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC27.42■■□□□ 1.98
SNED1Q8TER0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27.42■■□□□ 1.98
SNED1Q8TER0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNED1Q8TER0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNED1Q8TER0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
SNED1Q8TER0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNED1Q8TER0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SNED1Q8TER0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC27.42■■□□□ 1.98
SNED1Q8TER0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNED1Q8TER0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNED1Q8TER0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC27.41■■□□□ 1.98
SNED1Q8TER0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNED1Q8TER0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
SNED1Q8TER0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNED1Q8TER0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC27.41■■□□□ 1.98
SNED1Q8TER0 AC104771.1-201ENST00000603335 964 ntBASIC27.41■■□□□ 1.98
SNED1Q8TER0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNED1Q8TER0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.41■■□□□ 1.98
SNED1Q8TER0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNED1Q8TER0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNED1Q8TER0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNED1Q8TER0 ABHD17AP1-201ENST00000358206 933 ntBASIC27.41■■□□□ 1.98
SNED1Q8TER0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNED1Q8TER0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNED1Q8TER0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNED1Q8TER0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNED1Q8TER0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC27.4■■□□□ 1.98
SNED1Q8TER0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SNED1Q8TER0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNED1Q8TER0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNED1Q8TER0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNED1Q8TER0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SNED1Q8TER0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.4■■□□□ 1.98
SNED1Q8TER0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
SNED1Q8TER0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNED1Q8TER0 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.4■■□□□ 1.98
SNED1Q8TER0 GAS2L1P2-201ENST00000436355 1356 ntBASIC27.4■■□□□ 1.98
SNED1Q8TER0 FP325331.1-202ENST00000623531 1380 ntBASIC27.4■■□□□ 1.98
SNED1Q8TER0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC27.39■■□□□ 1.98
SNED1Q8TER0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.39■■□□□ 1.98
SNED1Q8TER0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SNED1Q8TER0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.39■■□□□ 1.98
SNED1Q8TER0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
SNED1Q8TER0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
SNED1Q8TER0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC27.39■■□□□ 1.97
SNED1Q8TER0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.39■■□□□ 1.97
SNED1Q8TER0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
SNED1Q8TER0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
SNED1Q8TER0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNED1Q8TER0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNED1Q8TER0 AP004607.4-201ENST00000530158 1459 ntBASIC27.38■■□□□ 1.97
SNED1Q8TER0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.38■■□□□ 1.97
SNED1Q8TER0 DBI-210ENST00000542275 757 ntTSL 5 BASIC27.38■■□□□ 1.97
SNED1Q8TER0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC27.38■■□□□ 1.97
SNED1Q8TER0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC27.38■■□□□ 1.97
SNED1Q8TER0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.38■■□□□ 1.97
SNED1Q8TER0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC27.38■■□□□ 1.97
SNED1Q8TER0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SNED1Q8TER0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SNED1Q8TER0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SNED1Q8TER0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC27.37■■□□□ 1.97
SNED1Q8TER0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.37■■□□□ 1.97
SNED1Q8TER0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC27.37■■□□□ 1.97
SNED1Q8TER0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC27.37■■□□□ 1.97
SNED1Q8TER0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC27.37■■□□□ 1.97
SNED1Q8TER0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC27.37■■□□□ 1.97
SNED1Q8TER0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SNED1Q8TER0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.37■■□□□ 1.97
SNED1Q8TER0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC27.37■■□□□ 1.97
SNED1Q8TER0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNED1Q8TER0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SNED1Q8TER0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNED1Q8TER0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27.36■■□□□ 1.97
SNED1Q8TER0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNED1Q8TER0 CROCCP5-201ENST00000436658 830 ntBASIC27.36■■□□□ 1.97
SNED1Q8TER0 MAP2K4P1-201ENST00000438453 1195 ntBASIC27.36■■□□□ 1.97
SNED1Q8TER0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNED1Q8TER0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SNED1Q8TER0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
SNED1Q8TER0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.36■■□□□ 1.97
SNED1Q8TER0 AC004854.2-201ENST00000608450 1441 ntBASIC27.35■■□□□ 1.97
SNED1Q8TER0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC27.35■■□□□ 1.97
SNED1Q8TER0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SNED1Q8TER0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
SNED1Q8TER0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
SNED1Q8TER0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SNED1Q8TER0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
SNED1Q8TER0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SNED1Q8TER0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC27.35■■□□□ 1.97
SNED1Q8TER0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SNED1Q8TER0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms