Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
TMC1Q8TDI8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
TMC1Q8TDI8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
TMC1Q8TDI8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC30.94■■■□□ 2.54
TMC1Q8TDI8 AC133637.1-201ENST00000624115 1537 ntBASIC30.94■■■□□ 2.54
TMC1Q8TDI8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
TMC1Q8TDI8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
TMC1Q8TDI8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC30.94■■■□□ 2.54
TMC1Q8TDI8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
TMC1Q8TDI8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC30.93■■■□□ 2.54
TMC1Q8TDI8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TMC1Q8TDI8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC30.93■■■□□ 2.54
TMC1Q8TDI8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC30.93■■■□□ 2.54
TMC1Q8TDI8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TMC1Q8TDI8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TMC1Q8TDI8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TMC1Q8TDI8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC30.93■■■□□ 2.54
TMC1Q8TDI8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
TMC1Q8TDI8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TMC1Q8TDI8 IRS3P-201ENST00000223076 1006 ntBASIC30.92■■■□□ 2.54
TMC1Q8TDI8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
TMC1Q8TDI8 AC126544.1-201ENST00000580842 1059 ntBASIC30.92■■■□□ 2.54
TMC1Q8TDI8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TMC1Q8TDI8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
TMC1Q8TDI8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC30.92■■■□□ 2.54
TMC1Q8TDI8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
TMC1Q8TDI8 FP325331.1-202ENST00000623531 1380 ntBASIC30.92■■■□□ 2.54
TMC1Q8TDI8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
TMC1Q8TDI8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
TMC1Q8TDI8 AC144652.1-201ENST00000609974 1624 ntBASIC30.91■■■□□ 2.54
TMC1Q8TDI8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TMC1Q8TDI8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC30.91■■■□□ 2.54
TMC1Q8TDI8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TMC1Q8TDI8 MPST-208ENST00000628507 698 ntTSL 5 BASIC30.91■■■□□ 2.54
TMC1Q8TDI8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC30.91■■■□□ 2.54
TMC1Q8TDI8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC30.91■■■□□ 2.54
TMC1Q8TDI8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
TMC1Q8TDI8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TMC1Q8TDI8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
TMC1Q8TDI8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC30.91■■■□□ 2.54
TMC1Q8TDI8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
TMC1Q8TDI8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
TMC1Q8TDI8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC30.9■■■□□ 2.54
TMC1Q8TDI8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TMC1Q8TDI8 AL499627.2-201ENST00000606283 725 ntBASIC30.9■■■□□ 2.54
TMC1Q8TDI8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC30.9■■■□□ 2.54
TMC1Q8TDI8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
TMC1Q8TDI8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
TMC1Q8TDI8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC30.89■■■□□ 2.54
TMC1Q8TDI8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC30.89■■■□□ 2.54
TMC1Q8TDI8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TMC1Q8TDI8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC30.89■■■□□ 2.54
TMC1Q8TDI8 DUX4L4-201ENST00000566884 1269 ntBASIC30.89■■■□□ 2.54
TMC1Q8TDI8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC30.89■■■□□ 2.54
TMC1Q8TDI8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC30.89■■■□□ 2.53
TMC1Q8TDI8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
TMC1Q8TDI8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.53
TMC1Q8TDI8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TMC1Q8TDI8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TMC1Q8TDI8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
TMC1Q8TDI8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
TMC1Q8TDI8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TMC1Q8TDI8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TMC1Q8TDI8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC30.88■■■□□ 2.53
TMC1Q8TDI8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC30.88■■■□□ 2.53
TMC1Q8TDI8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
TMC1Q8TDI8 LINC01529-204ENST00000636474 1715 ntBASIC30.87■■■□□ 2.53
TMC1Q8TDI8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC30.87■■■□□ 2.53
TMC1Q8TDI8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
TMC1Q8TDI8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
TMC1Q8TDI8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC30.87■■■□□ 2.53
TMC1Q8TDI8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TMC1Q8TDI8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC30.87■■■□□ 2.53
TMC1Q8TDI8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC30.87■■■□□ 2.53
TMC1Q8TDI8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TMC1Q8TDI8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC30.87■■■□□ 2.53
TMC1Q8TDI8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TMC1Q8TDI8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
TMC1Q8TDI8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TMC1Q8TDI8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
TMC1Q8TDI8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
TMC1Q8TDI8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TMC1Q8TDI8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TMC1Q8TDI8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC30.85■■■□□ 2.53
TMC1Q8TDI8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
TMC1Q8TDI8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
TMC1Q8TDI8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
TMC1Q8TDI8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.85■■■□□ 2.53
TMC1Q8TDI8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC30.85■■■□□ 2.53
TMC1Q8TDI8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC30.85■■■□□ 2.53
TMC1Q8TDI8 AC010525.1-201ENST00000585559 441 ntBASIC30.85■■■□□ 2.53
TMC1Q8TDI8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC30.85■■■□□ 2.53
TMC1Q8TDI8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
TMC1Q8TDI8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
TMC1Q8TDI8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TMC1Q8TDI8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TMC1Q8TDI8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC30.84■■■□□ 2.53
TMC1Q8TDI8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TMC1Q8TDI8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TMC1Q8TDI8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms