Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RDH11Q8TC12 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RDH11Q8TC12 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RDH11Q8TC12 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.9■■□□□ 1.1
RDH11Q8TC12 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.9■■□□□ 1.1
RDH11Q8TC12 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RDH11Q8TC12 SNX5-217ENST00000606557 1087 ntBASIC21.9■■□□□ 1.1
RDH11Q8TC12 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RDH11Q8TC12 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RDH11Q8TC12 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RDH11Q8TC12 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.9■■□□□ 1.1
RDH11Q8TC12 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RDH11Q8TC12 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RDH11Q8TC12 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RDH11Q8TC12 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RDH11Q8TC12 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RDH11Q8TC12 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RDH11Q8TC12 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RDH11Q8TC12 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RDH11Q8TC12 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RDH11Q8TC12 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RDH11Q8TC12 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RDH11Q8TC12 MIR4508-201ENST00000584178 70 ntBASIC21.88■■□□□ 1.09
RDH11Q8TC12 AC010980.1-201ENST00000587192 1142 ntBASIC21.88■■□□□ 1.09
RDH11Q8TC12 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.88■■□□□ 1.09
RDH11Q8TC12 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RDH11Q8TC12 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RDH11Q8TC12 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RDH11Q8TC12 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RDH11Q8TC12 C11orf96-202ENST00000528572 1834 ntBASIC21.87■■□□□ 1.09
RDH11Q8TC12 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RDH11Q8TC12 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RDH11Q8TC12 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
RDH11Q8TC12 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RDH11Q8TC12 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RDH11Q8TC12 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.87■■□□□ 1.09
RDH11Q8TC12 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.87■■□□□ 1.09
RDH11Q8TC12 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.87■■□□□ 1.09
RDH11Q8TC12 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
RDH11Q8TC12 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.87■■□□□ 1.09
RDH11Q8TC12 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.87■■□□□ 1.09
RDH11Q8TC12 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RDH11Q8TC12 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.87■■□□□ 1.09
RDH11Q8TC12 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RDH11Q8TC12 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RDH11Q8TC12 AC087742.1-201ENST00000575880 1738 ntBASIC21.86■■□□□ 1.09
RDH11Q8TC12 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.86■■□□□ 1.09
RDH11Q8TC12 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RDH11Q8TC12 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RDH11Q8TC12 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RDH11Q8TC12 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.86■■□□□ 1.09
RDH11Q8TC12 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.86■■□□□ 1.09
RDH11Q8TC12 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.86■■□□□ 1.09
RDH11Q8TC12 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RDH11Q8TC12 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RDH11Q8TC12 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.86■■□□□ 1.09
RDH11Q8TC12 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.85■■□□□ 1.09
RDH11Q8TC12 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
RDH11Q8TC12 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RDH11Q8TC12 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RDH11Q8TC12 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RDH11Q8TC12 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RDH11Q8TC12 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RDH11Q8TC12 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RDH11Q8TC12 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.85■■□□□ 1.09
RDH11Q8TC12 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.85■■□□□ 1.09
RDH11Q8TC12 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RDH11Q8TC12 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
RDH11Q8TC12 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RDH11Q8TC12 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RDH11Q8TC12 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.85■■□□□ 1.09
RDH11Q8TC12 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RDH11Q8TC12 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.85■■□□□ 1.09
RDH11Q8TC12 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RDH11Q8TC12 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RDH11Q8TC12 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
RDH11Q8TC12 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RDH11Q8TC12 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RDH11Q8TC12 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RDH11Q8TC12 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RDH11Q8TC12 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RDH11Q8TC12 AC080038.3-201ENST00000623346 1952 ntBASIC21.83■■□□□ 1.09
RDH11Q8TC12 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.83■■□□□ 1.09
RDH11Q8TC12 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
RDH11Q8TC12 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RDH11Q8TC12 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RDH11Q8TC12 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RDH11Q8TC12 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RDH11Q8TC12 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.83■■□□□ 1.09
RDH11Q8TC12 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RDH11Q8TC12 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
RDH11Q8TC12 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.83■■□□□ 1.08
RDH11Q8TC12 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RDH11Q8TC12 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.83■■□□□ 1.08
RDH11Q8TC12 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RDH11Q8TC12 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.82■■□□□ 1.08
RDH11Q8TC12 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RDH11Q8TC12 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
RDH11Q8TC12 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.82■■□□□ 1.08
RDH11Q8TC12 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms