Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.37■■□□□ 1.33
SHKBP1Q8TBC3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 IGHV3-19-201ENST00000521488 291 ntBASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 AC010525.1-201ENST00000585559 441 ntBASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
SHKBP1Q8TBC3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 DUX4L4-201ENST00000566884 1269 ntBASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 AL031602.1-201ENST00000633169 911 ntBASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 FP325331.1-202ENST00000623531 1380 ntBASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.35■■□□□ 1.33
SHKBP1Q8TBC3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.34■■□□□ 1.33
SHKBP1Q8TBC3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHKBP1Q8TBC3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHKBP1Q8TBC3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHKBP1Q8TBC3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SHKBP1Q8TBC3 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.34■■□□□ 1.33
SHKBP1Q8TBC3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.34■■□□□ 1.33
SHKBP1Q8TBC3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.34■■□□□ 1.33
SHKBP1Q8TBC3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHKBP1Q8TBC3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SHKBP1Q8TBC3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.34■■□□□ 1.33
SHKBP1Q8TBC3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHKBP1Q8TBC3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHKBP1Q8TBC3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.33■■□□□ 1.33
SHKBP1Q8TBC3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHKBP1Q8TBC3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SHKBP1Q8TBC3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.33■■□□□ 1.33
SHKBP1Q8TBC3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHKBP1Q8TBC3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHKBP1Q8TBC3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHKBP1Q8TBC3 YBX1P1-201ENST00000445822 960 ntBASIC23.33■■□□□ 1.33
SHKBP1Q8TBC3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SHKBP1Q8TBC3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SHKBP1Q8TBC3 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.33■■□□□ 1.32
SHKBP1Q8TBC3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.33■■□□□ 1.32
SHKBP1Q8TBC3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SHKBP1Q8TBC3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHKBP1Q8TBC3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHKBP1Q8TBC3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
SHKBP1Q8TBC3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.32■■□□□ 1.32
SHKBP1Q8TBC3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHKBP1Q8TBC3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHKBP1Q8TBC3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHKBP1Q8TBC3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SHKBP1Q8TBC3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHKBP1Q8TBC3 AC034268.1-201ENST00000441047 882 ntBASIC23.32■■□□□ 1.32
SHKBP1Q8TBC3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.32■■□□□ 1.32
SHKBP1Q8TBC3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SHKBP1Q8TBC3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SHKBP1Q8TBC3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 MIR572-201ENST00000384983 95 ntBASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 OR2I1P-207ENST00000453522 948 ntBASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHKBP1Q8TBC3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms