Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCLL1Q8TB92 GUSBP5-202ENST00000510805 1989 ntBASIC21.87■■□□□ 1.09
HMGCLL1Q8TB92 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 AL512631.2-201ENST00000604634 923 ntBASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 AC131212.1-201ENST00000613771 668 ntBASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCLL1Q8TB92 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 AC009102.2-201ENST00000606772 1639 ntBASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 LINC00526-201ENST00000581067 1875 ntBASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.85■■□□□ 1.09
HMGCLL1Q8TB92 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLL1Q8TB92 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLL1Q8TB92 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLL1Q8TB92 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLL1Q8TB92 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLL1Q8TB92 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLL1Q8TB92 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.84■■□□□ 1.09
HMGCLL1Q8TB92 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLL1Q8TB92 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLL1Q8TB92 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.84■■□□□ 1.09
HMGCLL1Q8TB92 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
HMGCLL1Q8TB92 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLL1Q8TB92 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLL1Q8TB92 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HMGCLL1Q8TB92 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HMGCLL1Q8TB92 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HMGCLL1Q8TB92 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
HMGCLL1Q8TB92 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.83■■□□□ 1.09
HMGCLL1Q8TB92 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HMGCLL1Q8TB92 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.83■■□□□ 1.09
HMGCLL1Q8TB92 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HMGCLL1Q8TB92 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HMGCLL1Q8TB92 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.83■■□□□ 1.09
HMGCLL1Q8TB92 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
HMGCLL1Q8TB92 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HMGCLL1Q8TB92 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HMGCLL1Q8TB92 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 AC131281.2-201ENST00000520478 145 ntBASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
HMGCLL1Q8TB92 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLL1Q8TB92 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLL1Q8TB92 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
HMGCLL1Q8TB92 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLL1Q8TB92 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLL1Q8TB92 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.81■■□□□ 1.08
HMGCLL1Q8TB92 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLL1Q8TB92 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.81■■□□□ 1.08
HMGCLL1Q8TB92 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLL1Q8TB92 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLL1Q8TB92 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
HMGCLL1Q8TB92 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLL1Q8TB92 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLL1Q8TB92 C17orf82-201ENST00000623772 1530 ntBASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms