Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.47■■□□□ 1.03
HIPK4Q8NE63 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
HIPK4Q8NE63 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.46■■□□□ 1.03
HIPK4Q8NE63 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HIPK4Q8NE63 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIPK4Q8NE63 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIPK4Q8NE63 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HIPK4Q8NE63 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HIPK4Q8NE63 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIPK4Q8NE63 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 DUX4L9-201ENST00000449051 1259 ntBASIC21.45■■□□□ 1.02
HIPK4Q8NE63 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.45■■□□□ 1.02
HIPK4Q8NE63 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
HIPK4Q8NE63 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HIPK4Q8NE63 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HIPK4Q8NE63 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.44■■□□□ 1.02
HIPK4Q8NE63 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
HIPK4Q8NE63 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
HIPK4Q8NE63 FBXW4P1-201ENST00000426721 2239 ntBASIC21.44■■□□□ 1.02
HIPK4Q8NE63 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.44■■□□□ 1.02
HIPK4Q8NE63 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
HIPK4Q8NE63 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HIPK4Q8NE63 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 ESRRAP2-201ENST00000418437 1549 ntBASIC21.42■■□□□ 1.02
HIPK4Q8NE63 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.42■■□□□ 1.02
HIPK4Q8NE63 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.42■■□□□ 1.02
HIPK4Q8NE63 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK4Q8NE63 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK4Q8NE63 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK4Q8NE63 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK4Q8NE63 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK4Q8NE63 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK4Q8NE63 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.41■■□□□ 1.02
HIPK4Q8NE63 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.41■■□□□ 1.02
HIPK4Q8NE63 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK4Q8NE63 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK4Q8NE63 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.41■■□□□ 1.02
HIPK4Q8NE63 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK4Q8NE63 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.41■■□□□ 1.02
HIPK4Q8NE63 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIPK4Q8NE63 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HIPK4Q8NE63 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIPK4Q8NE63 RARRES2P2-201ENST00000394842 485 ntBASIC21.4■■□□□ 1.02
HIPK4Q8NE63 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.4■■□□□ 1.02
HIPK4Q8NE63 C11orf96-202ENST00000528572 1834 ntBASIC21.4■■□□□ 1.02
HIPK4Q8NE63 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
HIPK4Q8NE63 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HIPK4Q8NE63 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
HIPK4Q8NE63 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
HIPK4Q8NE63 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
HIPK4Q8NE63 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HIPK4Q8NE63 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HIPK4Q8NE63 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HIPK4Q8NE63 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HIPK4Q8NE63 LONRF2P2-201ENST00000439212 571 ntBASIC21.39■■□□□ 1.01
HIPK4Q8NE63 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
HIPK4Q8NE63 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.39■■□□□ 1.01
HIPK4Q8NE63 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms