Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF439Q8NDP4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ZNF439Q8NDP4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF439Q8NDP4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF439Q8NDP4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF439Q8NDP4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF439Q8NDP4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF439Q8NDP4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF439Q8NDP4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF439Q8NDP4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF439Q8NDP4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF439Q8NDP4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF439Q8NDP4 AC010997.5-201ENST00000609182 354 ntBASIC18.34■□□□□ 0.53
ZNF439Q8NDP4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF439Q8NDP4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF439Q8NDP4 AC144652.1-201ENST00000609974 1624 ntBASIC18.34■□□□□ 0.53
ZNF439Q8NDP4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF439Q8NDP4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF439Q8NDP4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF439Q8NDP4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ZNF439Q8NDP4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF439Q8NDP4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.33■□□□□ 0.53
ZNF439Q8NDP4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF439Q8NDP4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF439Q8NDP4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.33■□□□□ 0.53
ZNF439Q8NDP4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.33■□□□□ 0.53
ZNF439Q8NDP4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF439Q8NDP4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ZNF439Q8NDP4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF439Q8NDP4 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF439Q8NDP4 TSPY9P-201ENST00000440215 945 ntBASIC18.33■□□□□ 0.52
ZNF439Q8NDP4 TSPY11P-201ENST00000442607 1045 ntBASIC18.33■□□□□ 0.52
ZNF439Q8NDP4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF439Q8NDP4 AL035685.1-201ENST00000636663 812 ntBASIC18.33■□□□□ 0.52
ZNF439Q8NDP4 AL353803.4-201ENST00000565882 1934 ntBASIC18.33■□□□□ 0.52
ZNF439Q8NDP4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF439Q8NDP4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF439Q8NDP4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 UNC93B8-201ENST00000511903 705 ntBASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF439Q8NDP4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF439Q8NDP4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF439Q8NDP4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF439Q8NDP4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ZNF439Q8NDP4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF439Q8NDP4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.31■□□□□ 0.52
ZNF439Q8NDP4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF439Q8NDP4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF439Q8NDP4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF439Q8NDP4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ZNF439Q8NDP4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ZNF439Q8NDP4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF439Q8NDP4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF439Q8NDP4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF439Q8NDP4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF439Q8NDP4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF439Q8NDP4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ZNF439Q8NDP4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.3■□□□□ 0.52
ZNF439Q8NDP4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.3■□□□□ 0.52
ZNF439Q8NDP4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF439Q8NDP4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF439Q8NDP4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.3■□□□□ 0.52
ZNF439Q8NDP4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ZNF439Q8NDP4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF439Q8NDP4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ZNF439Q8NDP4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF439Q8NDP4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF439Q8NDP4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF439Q8NDP4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms