Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.3■■□□□ 1.8
SLC44A5Q8NCS7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SLC44A5Q8NCS7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SLC44A5Q8NCS7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLC44A5Q8NCS7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLC44A5Q8NCS7 TSPY26P-201ENST00000476365 1326 ntBASIC26.29■■□□□ 1.8
SLC44A5Q8NCS7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SLC44A5Q8NCS7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.29■■□□□ 1.8
SLC44A5Q8NCS7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLC44A5Q8NCS7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
SLC44A5Q8NCS7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC44A5Q8NCS7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SLC44A5Q8NCS7 AL353803.4-201ENST00000565882 1934 ntBASIC26.28■■□□□ 1.8
SLC44A5Q8NCS7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.28■■□□□ 1.8
SLC44A5Q8NCS7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.28■■□□□ 1.8
SLC44A5Q8NCS7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC44A5Q8NCS7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC44A5Q8NCS7 OR2I1P-207ENST00000453522 948 ntBASIC26.28■■□□□ 1.8
SLC44A5Q8NCS7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC44A5Q8NCS7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.28■■□□□ 1.8
SLC44A5Q8NCS7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SLC44A5Q8NCS7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC44A5Q8NCS7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SLC44A5Q8NCS7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC44A5Q8NCS7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.27■■□□□ 1.8
SLC44A5Q8NCS7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SLC44A5Q8NCS7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SLC44A5Q8NCS7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC44A5Q8NCS7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SLC44A5Q8NCS7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
SLC44A5Q8NCS7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SLC44A5Q8NCS7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SLC44A5Q8NCS7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLC44A5Q8NCS7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLC44A5Q8NCS7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SLC44A5Q8NCS7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLC44A5Q8NCS7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLC44A5Q8NCS7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
SLC44A5Q8NCS7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.26■■□□□ 1.79
SLC44A5Q8NCS7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.26■■□□□ 1.79
SLC44A5Q8NCS7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SLC44A5Q8NCS7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
SLC44A5Q8NCS7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC44A5Q8NCS7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.25■■□□□ 1.79
SLC44A5Q8NCS7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC44A5Q8NCS7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
SLC44A5Q8NCS7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC44A5Q8NCS7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
SLC44A5Q8NCS7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC44A5Q8NCS7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC44A5Q8NCS7 AC087623.3-201ENST00000607047 1098 ntBASIC26.24■■□□□ 1.79
SLC44A5Q8NCS7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC44A5Q8NCS7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
SLC44A5Q8NCS7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC44A5Q8NCS7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.23■■□□□ 1.79
SLC44A5Q8NCS7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC44A5Q8NCS7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC44A5Q8NCS7 IGHV3-19-201ENST00000521488 291 ntBASIC26.23■■□□□ 1.79
SLC44A5Q8NCS7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SLC44A5Q8NCS7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
SLC44A5Q8NCS7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
SLC44A5Q8NCS7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC44A5Q8NCS7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 AC004687.1-201ENST00000579003 1625 ntBASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 MIR6821-201ENST00000617625 74 ntBASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC44A5Q8NCS7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.21■■□□□ 1.79
SLC44A5Q8NCS7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC44A5Q8NCS7 AC097381.1-201ENST00000429019 1296 ntBASIC26.21■■□□□ 1.79
SLC44A5Q8NCS7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.21■■□□□ 1.79
SLC44A5Q8NCS7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC44A5Q8NCS7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SLC44A5Q8NCS7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
SLC44A5Q8NCS7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
SLC44A5Q8NCS7 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.2■■□□□ 1.78
SLC44A5Q8NCS7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.2■■□□□ 1.78
SLC44A5Q8NCS7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SLC44A5Q8NCS7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC44A5Q8NCS7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SLC44A5Q8NCS7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SLC44A5Q8NCS7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC44A5Q8NCS7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.19■■□□□ 1.78
SLC44A5Q8NCS7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.19■■□□□ 1.78
SLC44A5Q8NCS7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
SLC44A5Q8NCS7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
SLC44A5Q8NCS7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLC44A5Q8NCS7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.18■■□□□ 1.78
SLC44A5Q8NCS7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms