Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC4A11Q8NBS3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.66■■□□□ 1.38
SLC4A11Q8NBS3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC4A11Q8NBS3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.66■■□□□ 1.38
SLC4A11Q8NBS3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC4A11Q8NBS3 DUX4L19-201ENST00000557448 1267 ntBASIC23.66■■□□□ 1.38
SLC4A11Q8NBS3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.66■■□□□ 1.38
SLC4A11Q8NBS3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
SLC4A11Q8NBS3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC4A11Q8NBS3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC4A11Q8NBS3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC4A11Q8NBS3 SYT6-210ENST00000641643 1587 ntBASIC23.65■■□□□ 1.38
SLC4A11Q8NBS3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
SLC4A11Q8NBS3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SLC4A11Q8NBS3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC4A11Q8NBS3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.65■■□□□ 1.38
SLC4A11Q8NBS3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLC4A11Q8NBS3 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.65■■□□□ 1.38
SLC4A11Q8NBS3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC4A11Q8NBS3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
SLC4A11Q8NBS3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC4A11Q8NBS3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC4A11Q8NBS3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC4A11Q8NBS3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC4A11Q8NBS3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SLC4A11Q8NBS3 UNC93B3-201ENST00000308076 687 ntBASIC23.64■■□□□ 1.37
SLC4A11Q8NBS3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.64■■□□□ 1.37
SLC4A11Q8NBS3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC4A11Q8NBS3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.64■■□□□ 1.37
SLC4A11Q8NBS3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.64■■□□□ 1.37
SLC4A11Q8NBS3 C9orf163-202ENST00000624034 2573 ntBASIC23.64■■□□□ 1.37
SLC4A11Q8NBS3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC4A11Q8NBS3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.64■■□□□ 1.37
SLC4A11Q8NBS3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.63■■□□□ 1.37
SLC4A11Q8NBS3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.63■■□□□ 1.37
SLC4A11Q8NBS3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC4A11Q8NBS3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC4A11Q8NBS3 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.63■■□□□ 1.37
SLC4A11Q8NBS3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.63■■□□□ 1.37
SLC4A11Q8NBS3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SLC4A11Q8NBS3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC4A11Q8NBS3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC4A11Q8NBS3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC4A11Q8NBS3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC4A11Q8NBS3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.62■■□□□ 1.37
SLC4A11Q8NBS3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC4A11Q8NBS3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC4A11Q8NBS3 AC096631.2-201ENST00000436136 790 ntBASIC23.62■■□□□ 1.37
SLC4A11Q8NBS3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.62■■□□□ 1.37
SLC4A11Q8NBS3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC4A11Q8NBS3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC4A11Q8NBS3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SLC4A11Q8NBS3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.61■■□□□ 1.37
SLC4A11Q8NBS3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.61■■□□□ 1.37
SLC4A11Q8NBS3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC4A11Q8NBS3 AL138724.1-201ENST00000606771 1088 ntBASIC23.61■■□□□ 1.37
SLC4A11Q8NBS3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.61■■□□□ 1.37
SLC4A11Q8NBS3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC4A11Q8NBS3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.61■■□□□ 1.37
SLC4A11Q8NBS3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SLC4A11Q8NBS3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC4A11Q8NBS3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC4A11Q8NBS3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 AC133637.1-201ENST00000624115 1537 ntBASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 AC110285.6-201ENST00000617652 491 ntBASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
SLC4A11Q8NBS3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC4A11Q8NBS3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC4A11Q8NBS3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SLC4A11Q8NBS3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SLC4A11Q8NBS3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.59■■□□□ 1.37
SLC4A11Q8NBS3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC4A11Q8NBS3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC4A11Q8NBS3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.59■■□□□ 1.37
SLC4A11Q8NBS3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC4A11Q8NBS3 AC004687.1-201ENST00000579003 1625 ntBASIC23.59■■□□□ 1.37
SLC4A11Q8NBS3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SLC4A11Q8NBS3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC4A11Q8NBS3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.58■■□□□ 1.37
SLC4A11Q8NBS3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.58■■□□□ 1.37
SLC4A11Q8NBS3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC4A11Q8NBS3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SLC4A11Q8NBS3 AL136162.1-201ENST00000607711 1078 ntBASIC23.58■■□□□ 1.37
SLC4A11Q8NBS3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
SLC4A11Q8NBS3 AC011298.3-201ENST00000615796 283 ntBASIC23.58■■□□□ 1.37
SLC4A11Q8NBS3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.58■■□□□ 1.37
SLC4A11Q8NBS3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SLC4A11Q8NBS3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms