Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.25■■□□□ 1.31
SCML4Q8N228 AL355001.2-201ENST00000620617 1191 ntBASIC23.25■■□□□ 1.31
SCML4Q8N228 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.25■■□□□ 1.31
SCML4Q8N228 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SCML4Q8N228 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SCML4Q8N228 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SCML4Q8N228 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCML4Q8N228 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.24■■□□□ 1.31
SCML4Q8N228 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCML4Q8N228 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.24■■□□□ 1.31
SCML4Q8N228 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCML4Q8N228 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.24■■□□□ 1.31
SCML4Q8N228 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SCML4Q8N228 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.24■■□□□ 1.31
SCML4Q8N228 SUDS3P1-201ENST00000505831 966 ntBASIC23.24■■□□□ 1.31
SCML4Q8N228 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.24■■□□□ 1.31
SCML4Q8N228 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.24■■□□□ 1.31
SCML4Q8N228 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.24■■□□□ 1.31
SCML4Q8N228 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SCML4Q8N228 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCML4Q8N228 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.24■■□□□ 1.31
SCML4Q8N228 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCML4Q8N228 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.23■■□□□ 1.31
SCML4Q8N228 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.23■■□□□ 1.31
SCML4Q8N228 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.23■■□□□ 1.31
SCML4Q8N228 AC005837.3-201ENST00000612163 286 ntBASIC23.23■■□□□ 1.31
SCML4Q8N228 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SCML4Q8N228 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCML4Q8N228 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCML4Q8N228 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCML4Q8N228 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCML4Q8N228 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
SCML4Q8N228 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.22■■□□□ 1.31
SCML4Q8N228 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SCML4Q8N228 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SCML4Q8N228 BX842568.3-201ENST00000418104 571 ntBASIC23.22■■□□□ 1.31
SCML4Q8N228 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCML4Q8N228 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCML4Q8N228 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCML4Q8N228 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.22■■□□□ 1.31
SCML4Q8N228 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCML4Q8N228 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCML4Q8N228 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCML4Q8N228 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCML4Q8N228 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCML4Q8N228 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SCML4Q8N228 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCML4Q8N228 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SCML4Q8N228 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
SCML4Q8N228 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCML4Q8N228 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.21■■□□□ 1.31
SCML4Q8N228 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCML4Q8N228 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCML4Q8N228 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCML4Q8N228 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SCML4Q8N228 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
SCML4Q8N228 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SCML4Q8N228 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCML4Q8N228 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.2■■□□□ 1.3
SCML4Q8N228 AP001330.3-201ENST00000520123 633 ntBASIC23.2■■□□□ 1.3
SCML4Q8N228 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.2■■□□□ 1.3
SCML4Q8N228 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.2■■□□□ 1.3
SCML4Q8N228 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.2■■□□□ 1.3
SCML4Q8N228 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCML4Q8N228 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCML4Q8N228 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCML4Q8N228 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SCML4Q8N228 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SCML4Q8N228 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SCML4Q8N228 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCML4Q8N228 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SCML4Q8N228 MIR939-201ENST00000401314 82 ntBASIC23.19■■□□□ 1.3
SCML4Q8N228 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SCML4Q8N228 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SCML4Q8N228 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SCML4Q8N228 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SCML4Q8N228 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.18■■□□□ 1.3
SCML4Q8N228 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.18■■□□□ 1.3
SCML4Q8N228 DUSP8P5-201ENST00000422884 1815 ntBASIC23.18■■□□□ 1.3
SCML4Q8N228 AL136967.2-201ENST00000623968 743 ntBASIC23.18■■□□□ 1.3
SCML4Q8N228 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCML4Q8N228 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCML4Q8N228 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.18■■□□□ 1.3
SCML4Q8N228 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SCML4Q8N228 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCML4Q8N228 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.18■■□□□ 1.3
SCML4Q8N228 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.17■■□□□ 1.3
SCML4Q8N228 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCML4Q8N228 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.17■■□□□ 1.3
SCML4Q8N228 AC027682.1-201ENST00000562846 899 ntBASIC23.17■■□□□ 1.3
SCML4Q8N228 AC233992.3-201ENST00000607491 485 ntBASIC23.17■■□□□ 1.3
SCML4Q8N228 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SCML4Q8N228 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCML4Q8N228 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCML4Q8N228 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.17■■□□□ 1.3
SCML4Q8N228 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCML4Q8N228 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SCML4Q8N228 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SCML4Q8N228 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
SCML4Q8N228 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms