Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC33.55■■■□□ 2.96
ABCA6Q8N139 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
ABCA6Q8N139 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
ABCA6Q8N139 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
ABCA6Q8N139 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC33.54■■■□□ 2.96
ABCA6Q8N139 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC33.54■■■□□ 2.96
ABCA6Q8N139 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC33.54■■■□□ 2.96
ABCA6Q8N139 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC33.54■■■□□ 2.96
ABCA6Q8N139 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC33.54■■■□□ 2.96
ABCA6Q8N139 SHD-204ENST00000599689 1729 ntTSL 5 BASIC33.54■■■□□ 2.96
ABCA6Q8N139 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC33.54■■■□□ 2.96
ABCA6Q8N139 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC33.54■■■□□ 2.96
ABCA6Q8N139 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC33.53■■■□□ 2.96
ABCA6Q8N139 COX20-201ENST00000366528 568 ntTSL 2 BASIC33.53■■■□□ 2.96
ABCA6Q8N139 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
ABCA6Q8N139 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC33.53■■■□□ 2.96
ABCA6Q8N139 GAMT-205ENST00000640762 751 ntTSL 5 BASIC33.53■■■□□ 2.96
ABCA6Q8N139 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC33.53■■■□□ 2.96
ABCA6Q8N139 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
ABCA6Q8N139 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
ABCA6Q8N139 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
ABCA6Q8N139 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
ABCA6Q8N139 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC33.52■■■□□ 2.96
ABCA6Q8N139 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
ABCA6Q8N139 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
ABCA6Q8N139 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC33.52■■■□□ 2.96
ABCA6Q8N139 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC33.51■■■□□ 2.96
ABCA6Q8N139 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
ABCA6Q8N139 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
ABCA6Q8N139 DUX4L4-201ENST00000566884 1269 ntBASIC33.51■■■□□ 2.96
ABCA6Q8N139 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC33.51■■■□□ 2.95
ABCA6Q8N139 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC33.51■■■□□ 2.95
ABCA6Q8N139 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC33.5■■■□□ 2.95
ABCA6Q8N139 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
ABCA6Q8N139 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC33.5■■■□□ 2.95
ABCA6Q8N139 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
ABCA6Q8N139 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
ABCA6Q8N139 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
ABCA6Q8N139 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
ABCA6Q8N139 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
ABCA6Q8N139 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC33.49■■■□□ 2.95
ABCA6Q8N139 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC33.49■■■□□ 2.95
ABCA6Q8N139 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
ABCA6Q8N139 WT1-AS_3.1-201ENST00000613262 234 ntBASIC33.49■■■□□ 2.95
ABCA6Q8N139 AL050303.2-201ENST00000619798 666 ntBASIC33.49■■■□□ 2.95
ABCA6Q8N139 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC33.48■■■□□ 2.95
ABCA6Q8N139 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC33.48■■■□□ 2.95
ABCA6Q8N139 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
ABCA6Q8N139 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
ABCA6Q8N139 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC33.48■■■□□ 2.95
ABCA6Q8N139 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
ABCA6Q8N139 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
ABCA6Q8N139 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC33.48■■■□□ 2.95
ABCA6Q8N139 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC33.48■■■□□ 2.95
ABCA6Q8N139 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
ABCA6Q8N139 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC33.47■■■□□ 2.95
ABCA6Q8N139 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
ABCA6Q8N139 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
ABCA6Q8N139 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
ABCA6Q8N139 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
ABCA6Q8N139 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
ABCA6Q8N139 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
ABCA6Q8N139 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC33.46■■■□□ 2.95
ABCA6Q8N139 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC33.46■■■□□ 2.95
ABCA6Q8N139 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC33.46■■■□□ 2.95
ABCA6Q8N139 SHF-207ENST00000560540 2062 ntTSL 5 BASIC33.46■■■□□ 2.95
ABCA6Q8N139 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC33.46■■■□□ 2.95
ABCA6Q8N139 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
ABCA6Q8N139 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
ABCA6Q8N139 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC33.46■■■□□ 2.95
ABCA6Q8N139 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC33.46■■■□□ 2.95
ABCA6Q8N139 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC33.45■■■□□ 2.95
ABCA6Q8N139 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
ABCA6Q8N139 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC33.45■■■□□ 2.95
ABCA6Q8N139 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
ABCA6Q8N139 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
ABCA6Q8N139 GUSBP6-202ENST00000438529 1198 ntBASIC33.44■■■□□ 2.94
ABCA6Q8N139 APTR-205ENST00000447009 902 ntTSL 2 BASIC33.44■■■□□ 2.94
ABCA6Q8N139 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
ABCA6Q8N139 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
ABCA6Q8N139 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC33.43■■■□□ 2.94
ABCA6Q8N139 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC33.43■■■□□ 2.94
ABCA6Q8N139 AC066615.1-201ENST00000640911 628 ntBASIC33.43■■■□□ 2.94
ABCA6Q8N139 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC33.43■■■□□ 2.94
ABCA6Q8N139 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC33.43■■■□□ 2.94
ABCA6Q8N139 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
ABCA6Q8N139 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
ABCA6Q8N139 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
ABCA6Q8N139 AC142086.2-201ENST00000569753 217 ntBASIC33.42■■■□□ 2.94
ABCA6Q8N139 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
ABCA6Q8N139 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
ABCA6Q8N139 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
ABCA6Q8N139 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC33.42■■■□□ 2.94
ABCA6Q8N139 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
ABCA6Q8N139 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC33.42■■■□□ 2.94
ABCA6Q8N139 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC33.41■■■□□ 2.94
ABCA6Q8N139 STX4-202ENST00000394998 1498 ntTSL 2 BASIC33.41■■■□□ 2.94
ABCA6Q8N139 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
ABCA6Q8N139 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC33.41■■■□□ 2.94
ABCA6Q8N139 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms