Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
SMC5Q8IY18 MTDHP2-201ENST00000601468 714 ntBASIC27.66■■■□□ 2.02
SMC5Q8IY18 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
SMC5Q8IY18 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SMC5Q8IY18 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
SMC5Q8IY18 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SMC5Q8IY18 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC27.65■■■□□ 2.02
SMC5Q8IY18 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SMC5Q8IY18 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SMC5Q8IY18 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
SMC5Q8IY18 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SMC5Q8IY18 STK25-234ENST00000535007 2459 ntTSL 2 BASIC27.65■■■□□ 2.02
SMC5Q8IY18 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
SMC5Q8IY18 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SMC5Q8IY18 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC27.64■■■□□ 2.02
SMC5Q8IY18 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.64■■■□□ 2.02
SMC5Q8IY18 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SMC5Q8IY18 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
SMC5Q8IY18 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SMC5Q8IY18 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SMC5Q8IY18 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.64■■■□□ 2.02
SMC5Q8IY18 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
SMC5Q8IY18 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
SMC5Q8IY18 AC010997.5-201ENST00000609182 354 ntBASIC27.64■■■□□ 2.02
SMC5Q8IY18 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC27.64■■■□□ 2.02
SMC5Q8IY18 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
SMC5Q8IY18 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC27.64■■■□□ 2.01
SMC5Q8IY18 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
SMC5Q8IY18 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
SMC5Q8IY18 TFPT-201ENST00000391757 774 ntTSL 5 BASIC27.63■■■□□ 2.01
SMC5Q8IY18 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
SMC5Q8IY18 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SMC5Q8IY18 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SMC5Q8IY18 AC242852.2-201ENST00000615738 1807 ntBASIC27.62■■■□□ 2.01
SMC5Q8IY18 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
SMC5Q8IY18 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
SMC5Q8IY18 NKILA-201ENST00000613231 537 ntTSL 4 BASIC27.62■■■□□ 2.01
SMC5Q8IY18 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.62■■■□□ 2.01
SMC5Q8IY18 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SMC5Q8IY18 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
SMC5Q8IY18 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.61■■■□□ 2.01
SMC5Q8IY18 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SMC5Q8IY18 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.61■■■□□ 2.01
SMC5Q8IY18 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SMC5Q8IY18 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SMC5Q8IY18 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SMC5Q8IY18 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SMC5Q8IY18 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.6■■■□□ 2.01
SMC5Q8IY18 UNC93B8-201ENST00000511903 705 ntBASIC27.6■■■□□ 2.01
SMC5Q8IY18 C17orf82-201ENST00000623772 1530 ntBASIC27.6■■■□□ 2.01
SMC5Q8IY18 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC27.6■■■□□ 2.01
SMC5Q8IY18 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SMC5Q8IY18 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SMC5Q8IY18 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SMC5Q8IY18 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SMC5Q8IY18 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
SMC5Q8IY18 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
SMC5Q8IY18 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.59■■■□□ 2.01
SMC5Q8IY18 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SMC5Q8IY18 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC27.59■■■□□ 2.01
SMC5Q8IY18 AC139530.1-201ENST00000575312 1977 ntBASIC27.59■■■□□ 2.01
SMC5Q8IY18 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
SMC5Q8IY18 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC27.58■■■□□ 2.01
SMC5Q8IY18 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SMC5Q8IY18 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SMC5Q8IY18 TSPY9P-201ENST00000440215 945 ntBASIC27.58■■■□□ 2.01
SMC5Q8IY18 TSPY11P-201ENST00000442607 1045 ntBASIC27.58■■■□□ 2.01
SMC5Q8IY18 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SMC5Q8IY18 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SMC5Q8IY18 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.58■■■□□ 2.01
SMC5Q8IY18 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
SMC5Q8IY18 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
SMC5Q8IY18 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
SMC5Q8IY18 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SMC5Q8IY18 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SMC5Q8IY18 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
SMC5Q8IY18 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.57■■■□□ 2
SMC5Q8IY18 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SMC5Q8IY18 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.57■■■□□ 2
SMC5Q8IY18 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
SMC5Q8IY18 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SMC5Q8IY18 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SMC5Q8IY18 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC27.56■■■□□ 2
SMC5Q8IY18 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.56■■■□□ 2
SMC5Q8IY18 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC27.56■■■□□ 2
SMC5Q8IY18 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SMC5Q8IY18 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC27.56■■■□□ 2
SMC5Q8IY18 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SMC5Q8IY18 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
SMC5Q8IY18 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
SMC5Q8IY18 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
SMC5Q8IY18 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC27.56■■■□□ 2
SMC5Q8IY18 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC27.56■■■□□ 2
SMC5Q8IY18 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.56■■■□□ 2
SMC5Q8IY18 LINC00565-201ENST00000562710 2331 ntBASIC27.56■■■□□ 2
SMC5Q8IY18 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC27.55■■■□□ 2
SMC5Q8IY18 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SMC5Q8IY18 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SMC5Q8IY18 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC27.55■■■□□ 2
SMC5Q8IY18 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms