Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ZC3HC1Q86WB0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.13■■□□□ 1.13
ZC3HC1Q86WB0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
ZC3HC1Q86WB0 FP325331.1-202ENST00000623531 1380 ntBASIC22.12■■□□□ 1.13
ZC3HC1Q86WB0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3HC1Q86WB0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3HC1Q86WB0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
ZC3HC1Q86WB0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
ZC3HC1Q86WB0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.12■■□□□ 1.13
ZC3HC1Q86WB0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.12■■□□□ 1.13
ZC3HC1Q86WB0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3HC1Q86WB0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.12■■□□□ 1.13
ZC3HC1Q86WB0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3HC1Q86WB0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
ZC3HC1Q86WB0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3HC1Q86WB0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3HC1Q86WB0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
ZC3HC1Q86WB0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
ZC3HC1Q86WB0 RARRES2P1-201ENST00000474487 481 ntBASIC22.11■■□□□ 1.13
ZC3HC1Q86WB0 KRT125P-201ENST00000546827 989 ntBASIC22.11■■□□□ 1.13
ZC3HC1Q86WB0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.11■■□□□ 1.13
ZC3HC1Q86WB0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3HC1Q86WB0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
ZC3HC1Q86WB0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.11■■□□□ 1.13
ZC3HC1Q86WB0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3HC1Q86WB0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3HC1Q86WB0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
ZC3HC1Q86WB0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.1■■□□□ 1.13
ZC3HC1Q86WB0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.1■■□□□ 1.13
ZC3HC1Q86WB0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3HC1Q86WB0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.1■■□□□ 1.13
ZC3HC1Q86WB0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
ZC3HC1Q86WB0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3HC1Q86WB0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3HC1Q86WB0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3HC1Q86WB0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 AC087742.1-201ENST00000575880 1738 ntBASIC22.09■■□□□ 1.13
ZC3HC1Q86WB0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
ZC3HC1Q86WB0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.08■■□□□ 1.13
ZC3HC1Q86WB0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ZC3HC1Q86WB0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ZC3HC1Q86WB0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.08■■□□□ 1.13
ZC3HC1Q86WB0 MIR4787-201ENST00000607364 84 ntBASIC22.08■■□□□ 1.13
ZC3HC1Q86WB0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ZC3HC1Q86WB0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ZC3HC1Q86WB0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ZC3HC1Q86WB0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
ZC3HC1Q86WB0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ZC3HC1Q86WB0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
ZC3HC1Q86WB0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
ZC3HC1Q86WB0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
ZC3HC1Q86WB0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZC3HC1Q86WB0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 MTDHP2-201ENST00000601468 714 ntBASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZC3HC1Q86WB0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ZC3HC1Q86WB0 AC139530.1-201ENST00000575312 1977 ntBASIC22.05■■□□□ 1.12
ZC3HC1Q86WB0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms