Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
LRRTM4Q86VH4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRRTM4Q86VH4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRTM4Q86VH4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.85■■□□□ 1.09
LRRTM4Q86VH4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.85■■□□□ 1.09
LRRTM4Q86VH4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRRTM4Q86VH4 AP001330.3-201ENST00000520123 633 ntBASIC21.85■■□□□ 1.09
LRRTM4Q86VH4 AF213884.3-201ENST00000563833 479 ntBASIC21.85■■□□□ 1.09
LRRTM4Q86VH4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.85■■□□□ 1.09
LRRTM4Q86VH4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRTM4Q86VH4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
LRRTM4Q86VH4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRTM4Q86VH4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRTM4Q86VH4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRTM4Q86VH4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LRRTM4Q86VH4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRTM4Q86VH4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.84■■□□□ 1.09
LRRTM4Q86VH4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRRTM4Q86VH4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LRRTM4Q86VH4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRTM4Q86VH4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.84■■□□□ 1.09
LRRTM4Q86VH4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRRTM4Q86VH4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
LRRTM4Q86VH4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRTM4Q86VH4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
LRRTM4Q86VH4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRTM4Q86VH4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRTM4Q86VH4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.83■■□□□ 1.09
LRRTM4Q86VH4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRTM4Q86VH4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRTM4Q86VH4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.83■■□□□ 1.09
LRRTM4Q86VH4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRTM4Q86VH4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRTM4Q86VH4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.83■■□□□ 1.09
LRRTM4Q86VH4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
LRRTM4Q86VH4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRRTM4Q86VH4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRRTM4Q86VH4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRRTM4Q86VH4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRTM4Q86VH4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.82■■□□□ 1.08
LRRTM4Q86VH4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
LRRTM4Q86VH4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRTM4Q86VH4 MIR939-201ENST00000401314 82 ntBASIC21.82■■□□□ 1.08
LRRTM4Q86VH4 BX842568.3-201ENST00000418104 571 ntBASIC21.82■■□□□ 1.08
LRRTM4Q86VH4 AC027682.1-201ENST00000562846 899 ntBASIC21.82■■□□□ 1.08
LRRTM4Q86VH4 AL136967.2-201ENST00000623968 743 ntBASIC21.82■■□□□ 1.08
LRRTM4Q86VH4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRTM4Q86VH4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.82■■□□□ 1.08
LRRTM4Q86VH4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.81■■□□□ 1.08
LRRTM4Q86VH4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRTM4Q86VH4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRTM4Q86VH4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRTM4Q86VH4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.81■■□□□ 1.08
LRRTM4Q86VH4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRTM4Q86VH4 AC091305.1-201ENST00000479476 895 ntBASIC21.81■■□□□ 1.08
LRRTM4Q86VH4 AC008764.7-201ENST00000593779 1081 ntBASIC21.81■■□□□ 1.08
LRRTM4Q86VH4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
LRRTM4Q86VH4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.8■■□□□ 1.08
LRRTM4Q86VH4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRTM4Q86VH4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRRTM4Q86VH4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRTM4Q86VH4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRTM4Q86VH4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.8■■□□□ 1.08
LRRTM4Q86VH4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.8■■□□□ 1.08
LRRTM4Q86VH4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRRTM4Q86VH4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRRTM4Q86VH4 AC233992.3-201ENST00000607491 485 ntBASIC21.8■■□□□ 1.08
LRRTM4Q86VH4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRTM4Q86VH4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRTM4Q86VH4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 OR2I1P-207ENST00000453522 948 ntBASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LRRTM4Q86VH4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 RASA4CP-201ENST00000424092 1398 ntBASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 AC004687.1-201ENST00000579003 1625 ntBASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 AC099791.1-201ENST00000416440 715 ntBASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 SLC47A1P1-202ENST00000449666 945 ntBASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms