Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF546Q86UE3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF546Q86UE3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF546Q86UE3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ZNF546Q86UE3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF546Q86UE3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF546Q86UE3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF546Q86UE3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ZNF546Q86UE3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF546Q86UE3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF546Q86UE3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF546Q86UE3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 AC005229.4-201ENST00000610085 2198 ntBASIC18.41■□□□□ 0.54
ZNF546Q86UE3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ZNF546Q86UE3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 RPS2P35-201ENST00000443417 897 ntBASIC18.4■□□□□ 0.54
ZNF546Q86UE3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF546Q86UE3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZNF546Q86UE3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZNF546Q86UE3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.39■□□□□ 0.54
ZNF546Q86UE3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.39■□□□□ 0.54
ZNF546Q86UE3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF546Q86UE3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF546Q86UE3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF546Q86UE3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF546Q86UE3 ZNRF2P2-203ENST00000454624 420 ntBASIC18.39■□□□□ 0.53
ZNF546Q86UE3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF546Q86UE3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF546Q86UE3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ZNF546Q86UE3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ZNF546Q86UE3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF546Q86UE3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF546Q86UE3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
ZNF546Q86UE3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF546Q86UE3 FAM99A-202ENST00000538190 1989 ntBASIC18.39■□□□□ 0.53
ZNF546Q86UE3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
ZNF546Q86UE3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF546Q86UE3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF546Q86UE3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF546Q86UE3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms