Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.73■□□□□ 0.91
RTL4Q6ZR62 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL4Q6ZR62 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RTL4Q6ZR62 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.72■□□□□ 0.91
RTL4Q6ZR62 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL4Q6ZR62 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL4Q6ZR62 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.72■□□□□ 0.91
RTL4Q6ZR62 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RTL4Q6ZR62 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.72■□□□□ 0.91
RTL4Q6ZR62 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL4Q6ZR62 AC099791.2-201ENST00000605725 427 ntBASIC20.72■□□□□ 0.91
RTL4Q6ZR62 AL136162.1-201ENST00000607711 1078 ntBASIC20.72■□□□□ 0.91
RTL4Q6ZR62 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RTL4Q6ZR62 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL4Q6ZR62 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTL4Q6ZR62 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.72■□□□□ 0.91
RTL4Q6ZR62 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTL4Q6ZR62 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL4Q6ZR62 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RTL4Q6ZR62 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.71■□□□□ 0.91
RTL4Q6ZR62 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.71■□□□□ 0.91
RTL4Q6ZR62 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTL4Q6ZR62 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RTL4Q6ZR62 PBX2P1-201ENST00000493219 1291 ntBASIC20.71■□□□□ 0.91
RTL4Q6ZR62 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.71■□□□□ 0.91
RTL4Q6ZR62 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.71■□□□□ 0.91
RTL4Q6ZR62 AC106739.1-201ENST00000617035 715 ntBASIC20.71■□□□□ 0.91
RTL4Q6ZR62 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.71■□□□□ 0.91
RTL4Q6ZR62 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTL4Q6ZR62 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RTL4Q6ZR62 SYT6-210ENST00000641643 1587 ntBASIC20.71■□□□□ 0.91
RTL4Q6ZR62 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTL4Q6ZR62 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL4Q6ZR62 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL4Q6ZR62 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL4Q6ZR62 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL4Q6ZR62 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
RTL4Q6ZR62 AC133561.4-201ENST00000566112 224 ntBASIC20.7■□□□□ 0.9
RTL4Q6ZR62 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.7■□□□□ 0.9
RTL4Q6ZR62 AC135279.3-201ENST00000610945 1311 ntBASIC20.7■□□□□ 0.9
RTL4Q6ZR62 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.7■□□□□ 0.9
RTL4Q6ZR62 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.7■□□□□ 0.9
RTL4Q6ZR62 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTL4Q6ZR62 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RTL4Q6ZR62 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL4Q6ZR62 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL4Q6ZR62 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTL4Q6ZR62 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL4Q6ZR62 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RTL4Q6ZR62 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.69■□□□□ 0.9
RTL4Q6ZR62 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL4Q6ZR62 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RTL4Q6ZR62 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL4Q6ZR62 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL4Q6ZR62 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL4Q6ZR62 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.68■□□□□ 0.9
RTL4Q6ZR62 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTL4Q6ZR62 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL4Q6ZR62 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.68■□□□□ 0.9
RTL4Q6ZR62 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL4Q6ZR62 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.68■□□□□ 0.9
RTL4Q6ZR62 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTL4Q6ZR62 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL4Q6ZR62 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.67■□□□□ 0.9
RTL4Q6ZR62 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL4Q6ZR62 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL4Q6ZR62 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RTL4Q6ZR62 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL4Q6ZR62 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.67■□□□□ 0.9
RTL4Q6ZR62 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.67■□□□□ 0.9
RTL4Q6ZR62 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL4Q6ZR62 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.66■□□□□ 0.9
RTL4Q6ZR62 AC024257.2-201ENST00000549699 147 ntBASIC20.66■□□□□ 0.9
RTL4Q6ZR62 AC009086.3-201ENST00000623486 1008 ntBASIC20.66■□□□□ 0.9
RTL4Q6ZR62 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.66■□□□□ 0.9
RTL4Q6ZR62 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL4Q6ZR62 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL4Q6ZR62 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL4Q6ZR62 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL4Q6ZR62 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.66■□□□□ 0.9
RTL4Q6ZR62 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL4Q6ZR62 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL4Q6ZR62 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RTL4Q6ZR62 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL4Q6ZR62 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL4Q6ZR62 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL4Q6ZR62 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL4Q6ZR62 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.65■□□□□ 0.9
RTL4Q6ZR62 AL138724.1-201ENST00000606771 1088 ntBASIC20.65■□□□□ 0.9
RTL4Q6ZR62 AC005837.3-201ENST00000612163 286 ntBASIC20.65■□□□□ 0.9
RTL4Q6ZR62 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTL4Q6ZR62 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms