Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.04■■□□□ 1.28
FOXR1Q6PIV2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
FOXR1Q6PIV2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FOXR1Q6PIV2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
FOXR1Q6PIV2 MIR935-201ENST00000401179 91 ntBASIC23.04■■□□□ 1.28
FOXR1Q6PIV2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.04■■□□□ 1.28
FOXR1Q6PIV2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.04■■□□□ 1.28
FOXR1Q6PIV2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
FOXR1Q6PIV2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
FOXR1Q6PIV2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXR1Q6PIV2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXR1Q6PIV2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXR1Q6PIV2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FOXR1Q6PIV2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FOXR1Q6PIV2 HLA-L-211ENST00000482052 1765 ntBASIC23.02■■□□□ 1.28
FOXR1Q6PIV2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXR1Q6PIV2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FOXR1Q6PIV2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXR1Q6PIV2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.02■■□□□ 1.28
FOXR1Q6PIV2 UNC93B8-201ENST00000511903 705 ntBASIC23.02■■□□□ 1.28
FOXR1Q6PIV2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.02■■□□□ 1.28
FOXR1Q6PIV2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXR1Q6PIV2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXR1Q6PIV2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXR1Q6PIV2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXR1Q6PIV2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXR1Q6PIV2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FOXR1Q6PIV2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.01■■□□□ 1.27
FOXR1Q6PIV2 AC022616.5-201ENST00000518796 181 ntBASIC23.01■■□□□ 1.27
FOXR1Q6PIV2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.01■■□□□ 1.27
FOXR1Q6PIV2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.01■■□□□ 1.27
FOXR1Q6PIV2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXR1Q6PIV2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.01■■□□□ 1.27
FOXR1Q6PIV2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.01■■□□□ 1.27
FOXR1Q6PIV2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXR1Q6PIV2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23■■□□□ 1.27
FOXR1Q6PIV2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FOXR1Q6PIV2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23■■□□□ 1.27
FOXR1Q6PIV2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23■■□□□ 1.27
FOXR1Q6PIV2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FOXR1Q6PIV2 KRT18P10-201ENST00000388836 1287 ntBASIC23■■□□□ 1.27
FOXR1Q6PIV2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23■■□□□ 1.27
FOXR1Q6PIV2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23■■□□□ 1.27
FOXR1Q6PIV2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23■■□□□ 1.27
FOXR1Q6PIV2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FOXR1Q6PIV2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FOXR1Q6PIV2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FOXR1Q6PIV2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23■■□□□ 1.27
FOXR1Q6PIV2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
FOXR1Q6PIV2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.99■■□□□ 1.27
FOXR1Q6PIV2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
FOXR1Q6PIV2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
FOXR1Q6PIV2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
FOXR1Q6PIV2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
FOXR1Q6PIV2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
FOXR1Q6PIV2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.99■■□□□ 1.27
FOXR1Q6PIV2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
FOXR1Q6PIV2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
FOXR1Q6PIV2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
FOXR1Q6PIV2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.99■■□□□ 1.27
FOXR1Q6PIV2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FOXR1Q6PIV2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
FOXR1Q6PIV2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FOXR1Q6PIV2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.98■■□□□ 1.27
FOXR1Q6PIV2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
FOXR1Q6PIV2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
FOXR1Q6PIV2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 AL391422.3-201ENST00000603791 2761 ntBASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 MIR6089-201ENST00000616698 64 ntBASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.97■■□□□ 1.27
FOXR1Q6PIV2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXR1Q6PIV2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
FOXR1Q6PIV2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
FOXR1Q6PIV2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms