Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 AC083880.1-201ENST00000608266 535 ntBASIC12.14□□□□□ -0.47
RNF213Q63HN8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF213Q63HN8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC12.13□□□□□ -0.47
RNF213Q63HN8 AC231657.2-201ENST00000624556 255 ntBASIC12.13□□□□□ -0.47
RNF213Q63HN8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RNF213Q63HN8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RNF213Q63HN8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC12.13□□□□□ -0.47
RNF213Q63HN8 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.13□□□□□ -0.47
RNF213Q63HN8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC12.13□□□□□ -0.47
RNF213Q63HN8 AC012306.2-201ENST00000609350 630 ntBASIC12.13□□□□□ -0.47
RNF213Q63HN8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF213Q63HN8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC12.13□□□□□ -0.47
RNF213Q63HN8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RNF213Q63HN8 AC105233.4-201ENST00000642045 216 ntBASIC12.13□□□□□ -0.47
RNF213Q63HN8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC12.13□□□□□ -0.47
RNF213Q63HN8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF213Q63HN8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.12□□□□□ -0.47
RNF213Q63HN8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
RNF213Q63HN8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
RNF213Q63HN8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RNF213Q63HN8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF213Q63HN8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF213Q63HN8 DUX4L4-201ENST00000566884 1269 ntBASIC12.12□□□□□ -0.47
RNF213Q63HN8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.12□□□□□ -0.47
RNF213Q63HN8 Z99916.2-201ENST00000604037 246 ntBASIC12.12□□□□□ -0.47
RNF213Q63HN8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF213Q63HN8 AL121894.2-201ENST00000602977 491 ntBASIC12.12□□□□□ -0.47
RNF213Q63HN8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.12□□□□□ -0.47
RNF213Q63HN8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC12.12□□□□□ -0.47
RNF213Q63HN8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RNF213Q63HN8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC12.12□□□□□ -0.47
RNF213Q63HN8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF213Q63HN8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
RNF213Q63HN8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.12□□□□□ -0.47
RNF213Q63HN8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RNF213Q63HN8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RNF213Q63HN8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RNF213Q63HN8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC12.12□□□□□ -0.47
RNF213Q63HN8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RNF213Q63HN8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RNF213Q63HN8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 AC007322.1-201ENST00000426983 750 ntBASIC12.11□□□□□ -0.47
RNF213Q63HN8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.11□□□□□ -0.47
RNF213Q63HN8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.11□□□□□ -0.47
RNF213Q63HN8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF213Q63HN8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF213Q63HN8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
RNF213Q63HN8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RNF213Q63HN8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF213Q63HN8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF213Q63HN8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.1□□□□□ -0.47
RNF213Q63HN8 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.1□□□□□ -0.47
RNF213Q63HN8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RNF213Q63HN8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
RNF213Q63HN8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF213Q63HN8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RNF213Q63HN8 CNN2P6-201ENST00000439038 900 ntBASIC12.1□□□□□ -0.47
RNF213Q63HN8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.1□□□□□ -0.47
RNF213Q63HN8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RNF213Q63HN8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF213Q63HN8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.1□□□□□ -0.47
RNF213Q63HN8 REXO1L12P-201ENST00000622156 912 ntBASIC12.1□□□□□ -0.47
RNF213Q63HN8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RNF213Q63HN8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF213Q63HN8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC12.1□□□□□ -0.47
RNF213Q63HN8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC12.1□□□□□ -0.47
RNF213Q63HN8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF213Q63HN8 UBE2DNL-204ENST00000602536 740 ntBASIC12.1□□□□□ -0.47
RNF213Q63HN8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RNF213Q63HN8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
RNF213Q63HN8 C2orf69P4-201ENST00000565394 541 ntBASIC12.09□□□□□ -0.47
RNF213Q63HN8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.09□□□□□ -0.47
RNF213Q63HN8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC12.09□□□□□ -0.47
RNF213Q63HN8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms