Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.67■□□□□ 0.9
HLA-DQA1Q5Y7H0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.67■□□□□ 0.9
HLA-DQA1Q5Y7H0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQA1Q5Y7H0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQA1Q5Y7H0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.67■□□□□ 0.9
HLA-DQA1Q5Y7H0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.67■□□□□ 0.9
HLA-DQA1Q5Y7H0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQA1Q5Y7H0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQA1Q5Y7H0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HLA-DQA1Q5Y7H0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HLA-DQA1Q5Y7H0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 AC006455.2-201ENST00000429931 906 ntBASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.66■□□□□ 0.9
HLA-DQA1Q5Y7H0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 AC096631.2-201ENST00000436136 790 ntBASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 pRNA.6-201ENST00000610482 90 ntBASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 pRNA.5-201ENST00000612139 90 ntBASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 pRNA.11-201ENST00000618423 90 ntBASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 pRNA.13-201ENST00000619112 90 ntBASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA1Q5Y7H0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.64■□□□□ 0.9
HLA-DQA1Q5Y7H0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.64■□□□□ 0.9
HLA-DQA1Q5Y7H0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.64■□□□□ 0.9
HLA-DQA1Q5Y7H0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
HLA-DQA1Q5Y7H0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 UNC93B3-201ENST00000308076 687 ntBASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQA1Q5Y7H0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HLA-DQA1Q5Y7H0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQA1Q5Y7H0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.63■□□□□ 0.89
HLA-DQA1Q5Y7H0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.63■□□□□ 0.89
HLA-DQA1Q5Y7H0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HLA-DQA1Q5Y7H0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQA1Q5Y7H0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQA1Q5Y7H0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.63■□□□□ 0.89
HLA-DQA1Q5Y7H0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DQA1Q5Y7H0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQA1Q5Y7H0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQA1Q5Y7H0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DQA1Q5Y7H0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 AL138724.1-201ENST00000606771 1088 ntBASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
HLA-DQA1Q5Y7H0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 SERBP1P1-201ENST00000396021 1160 ntBASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms