Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CDCP2Q5VXM1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCP2Q5VXM1 HLA-L-209ENST00000420110 1011 ntBASIC21.33■■□□□ 1.01
CDCP2Q5VXM1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.33■■□□□ 1.01
CDCP2Q5VXM1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCP2Q5VXM1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.33■■□□□ 1.01
CDCP2Q5VXM1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
CDCP2Q5VXM1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.33■■□□□ 1.01
CDCP2Q5VXM1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCP2Q5VXM1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDCP2Q5VXM1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.33■■□□□ 1
CDCP2Q5VXM1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.33■■□□□ 1
CDCP2Q5VXM1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.32■■□□□ 1
CDCP2Q5VXM1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCP2Q5VXM1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCP2Q5VXM1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.32■■□□□ 1
CDCP2Q5VXM1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.32■■□□□ 1
CDCP2Q5VXM1 AC080038.1-201ENST00000611274 1154 ntBASIC21.32■■□□□ 1
CDCP2Q5VXM1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDCP2Q5VXM1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDCP2Q5VXM1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.31■■□□□ 1
CDCP2Q5VXM1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDCP2Q5VXM1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDCP2Q5VXM1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.31■■□□□ 1
CDCP2Q5VXM1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.31■■□□□ 1
CDCP2Q5VXM1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CDCP2Q5VXM1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
CDCP2Q5VXM1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CDCP2Q5VXM1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.3■■□□□ 1
CDCP2Q5VXM1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.3■■□□□ 1
CDCP2Q5VXM1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDCP2Q5VXM1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.3■■□□□ 1
CDCP2Q5VXM1 RAP2CP1-201ENST00000605103 478 ntBASIC21.3■■□□□ 1
CDCP2Q5VXM1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDCP2Q5VXM1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CDCP2Q5VXM1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
CDCP2Q5VXM1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.29■■□□□ 1
CDCP2Q5VXM1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CDCP2Q5VXM1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDCP2Q5VXM1 AC144652.1-201ENST00000609974 1624 ntBASIC21.29■■□□□ 1
CDCP2Q5VXM1 LINC01529-204ENST00000636474 1715 ntBASIC21.29■■□□□ 1
CDCP2Q5VXM1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CDCP2Q5VXM1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.29■■□□□ 1
CDCP2Q5VXM1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDCP2Q5VXM1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDCP2Q5VXM1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
CDCP2Q5VXM1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.29■■□□□ 1
CDCP2Q5VXM1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.29■■□□□ 1
CDCP2Q5VXM1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.29■■□□□ 1
CDCP2Q5VXM1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.29■■□□□ 1
CDCP2Q5VXM1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.29■■□□□ 1
CDCP2Q5VXM1 TPRG1LP1-201ENST00000598702 760 ntBASIC21.29■■□□□ 1
CDCP2Q5VXM1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDCP2Q5VXM1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDCP2Q5VXM1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDCP2Q5VXM1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDCP2Q5VXM1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDCP2Q5VXM1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDCP2Q5VXM1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDCP2Q5VXM1 AP003733.4-201ENST00000623785 1697 ntBASIC21.28■■□□□ 1
CDCP2Q5VXM1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.28■■□□□ 1
CDCP2Q5VXM1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.28■■□□□ 1
CDCP2Q5VXM1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.28■■□□□ 1
CDCP2Q5VXM1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.28■■□□□ 1
CDCP2Q5VXM1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDCP2Q5VXM1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDCP2Q5VXM1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.28■■□□□ 1
CDCP2Q5VXM1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CDCP2Q5VXM1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCP2Q5VXM1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CDCP2Q5VXM1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCP2Q5VXM1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCP2Q5VXM1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCP2Q5VXM1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDCP2Q5VXM1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.27■■□□□ 1
CDCP2Q5VXM1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.27■■□□□ 1
CDCP2Q5VXM1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.27■■□□□ 1
CDCP2Q5VXM1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.27■■□□□ 1
CDCP2Q5VXM1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.27■■□□□ 1
CDCP2Q5VXM1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.27■■□□□ 1
CDCP2Q5VXM1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCP2Q5VXM1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCP2Q5VXM1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 CDCA4P2-201ENST00000441182 718 ntBASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.26■□□□□ 0.99
CDCP2Q5VXM1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.25■□□□□ 0.99
CDCP2Q5VXM1 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.25■□□□□ 0.99
CDCP2Q5VXM1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CDCP2Q5VXM1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms