Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13DQ5THJ4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13DQ5THJ4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13DQ5THJ4 AC080038.1-201ENST00000611274 1154 ntBASIC15.19■□□□□ 0.02
VPS13DQ5THJ4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13DQ5THJ4 AC022211.4-201ENST00000625094 2161 ntBASIC15.19■□□□□ 0.02
VPS13DQ5THJ4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
VPS13DQ5THJ4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13DQ5THJ4 AC004854.2-201ENST00000608450 1441 ntBASIC15.19■□□□□ 0.02
VPS13DQ5THJ4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.19■□□□□ 0.02
VPS13DQ5THJ4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VPS13DQ5THJ4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 AC144652.1-201ENST00000609974 1624 ntBASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS13DQ5THJ4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.17■□□□□ 0.02
VPS13DQ5THJ4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.16■□□□□ 0.02
VPS13DQ5THJ4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.15■□□□□ 0.02
VPS13DQ5THJ4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.14■□□□□ 0.01
VPS13DQ5THJ4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms