Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARFGEF3Q5TH69 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.93■□□□□ 0.62
ARFGEF3Q5TH69 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARFGEF3Q5TH69 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARFGEF3Q5TH69 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ARFGEF3Q5TH69 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARFGEF3Q5TH69 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARFGEF3Q5TH69 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ARFGEF3Q5TH69 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ARFGEF3Q5TH69 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ARFGEF3Q5TH69 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ARFGEF3Q5TH69 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.92■□□□□ 0.62
ARFGEF3Q5TH69 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARFGEF3Q5TH69 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ARFGEF3Q5TH69 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.92■□□□□ 0.62
ARFGEF3Q5TH69 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARFGEF3Q5TH69 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 AC027612.3-201ENST00000413684 1047 ntBASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 AL162430.1-201ENST00000480705 870 ntBASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 IGHV3-19-201ENST00000521488 291 ntBASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 TSPY26P-201ENST00000476365 1326 ntBASIC18.9■□□□□ 0.62
ARFGEF3Q5TH69 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ARFGEF3Q5TH69 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.89■□□□□ 0.62
ARFGEF3Q5TH69 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
ARFGEF3Q5TH69 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.89■□□□□ 0.62
ARFGEF3Q5TH69 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.89■□□□□ 0.62
ARFGEF3Q5TH69 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.89■□□□□ 0.62
ARFGEF3Q5TH69 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.89■□□□□ 0.62
ARFGEF3Q5TH69 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARFGEF3Q5TH69 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARFGEF3Q5TH69 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARFGEF3Q5TH69 DUX4L4-201ENST00000566884 1269 ntBASIC18.89■□□□□ 0.61
ARFGEF3Q5TH69 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARFGEF3Q5TH69 LINC01529-204ENST00000636474 1715 ntBASIC18.89■□□□□ 0.61
ARFGEF3Q5TH69 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARFGEF3Q5TH69 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARFGEF3Q5TH69 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARFGEF3Q5TH69 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARFGEF3Q5TH69 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 OR2I1P-207ENST00000453522 948 ntBASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARFGEF3Q5TH69 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ARFGEF3Q5TH69 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ARFGEF3Q5TH69 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ARFGEF3Q5TH69 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.87■□□□□ 0.61
ARFGEF3Q5TH69 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.87■□□□□ 0.61
ARFGEF3Q5TH69 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
ARFGEF3Q5TH69 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
ARFGEF3Q5TH69 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ARFGEF3Q5TH69 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 AL358852.1-201ENST00000623174 1268 ntBASIC18.86■□□□□ 0.61
ARFGEF3Q5TH69 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms