Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 AC004987.1-201ENST00000428627 508 ntBASIC21.34■■□□□ 1.01
PDCD4Q53EL6 ATP5G2P3-201ENST00000429083 425 ntBASIC21.34■■□□□ 1.01
PDCD4Q53EL6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.34■■□□□ 1.01
PDCD4Q53EL6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.34■■□□□ 1.01
PDCD4Q53EL6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDCD4Q53EL6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDCD4Q53EL6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.34■■□□□ 1.01
PDCD4Q53EL6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDCD4Q53EL6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDCD4Q53EL6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PDCD4Q53EL6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDCD4Q53EL6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDCD4Q53EL6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.33■■□□□ 1.01
PDCD4Q53EL6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.33■■□□□ 1.01
PDCD4Q53EL6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.33■■□□□ 1.01
PDCD4Q53EL6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDCD4Q53EL6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
PDCD4Q53EL6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PDCD4Q53EL6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PDCD4Q53EL6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDCD4Q53EL6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDCD4Q53EL6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDCD4Q53EL6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.32■■□□□ 1
PDCD4Q53EL6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDCD4Q53EL6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDCD4Q53EL6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PDCD4Q53EL6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDCD4Q53EL6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.32■■□□□ 1
PDCD4Q53EL6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDCD4Q53EL6 AC092053.2-201ENST00000640557 1818 ntBASIC21.32■■□□□ 1
PDCD4Q53EL6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDCD4Q53EL6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDCD4Q53EL6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDCD4Q53EL6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.31■■□□□ 1
PDCD4Q53EL6 AC144652.1-201ENST00000609974 1624 ntBASIC21.31■■□□□ 1
PDCD4Q53EL6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.31■■□□□ 1
PDCD4Q53EL6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDCD4Q53EL6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PDCD4Q53EL6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDCD4Q53EL6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDCD4Q53EL6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDCD4Q53EL6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDCD4Q53EL6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDCD4Q53EL6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
PDCD4Q53EL6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PDCD4Q53EL6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PDCD4Q53EL6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDCD4Q53EL6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDCD4Q53EL6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.3■■□□□ 1
PDCD4Q53EL6 AC010980.1-201ENST00000587192 1142 ntBASIC21.3■■□□□ 1
PDCD4Q53EL6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDCD4Q53EL6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.3■■□□□ 1
PDCD4Q53EL6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDCD4Q53EL6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDCD4Q53EL6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.3■■□□□ 1
PDCD4Q53EL6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PDCD4Q53EL6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDCD4Q53EL6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PDCD4Q53EL6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PDCD4Q53EL6 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.29■■□□□ 1
PDCD4Q53EL6 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.29■■□□□ 1
PDCD4Q53EL6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDCD4Q53EL6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDCD4Q53EL6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.29■■□□□ 1
PDCD4Q53EL6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.29■■□□□ 1
PDCD4Q53EL6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.29■■□□□ 1
PDCD4Q53EL6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PDCD4Q53EL6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PDCD4Q53EL6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDCD4Q53EL6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.29■■□□□ 1
PDCD4Q53EL6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDCD4Q53EL6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PDCD4Q53EL6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PDCD4Q53EL6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PDCD4Q53EL6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PDCD4Q53EL6 SNX5-217ENST00000606557 1087 ntBASIC21.28■■□□□ 1
PDCD4Q53EL6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.28■■□□□ 1
PDCD4Q53EL6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDCD4Q53EL6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDCD4Q53EL6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
PDCD4Q53EL6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.28■■□□□ 1
PDCD4Q53EL6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.28■■□□□ 1
PDCD4Q53EL6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDCD4Q53EL6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDCD4Q53EL6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.28■■□□□ 1
PDCD4Q53EL6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PDCD4Q53EL6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDCD4Q53EL6 AC087742.1-201ENST00000575880 1738 ntBASIC21.27■■□□□ 1
PDCD4Q53EL6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDCD4Q53EL6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.27■■□□□ 1
PDCD4Q53EL6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDCD4Q53EL6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDCD4Q53EL6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
PDCD4Q53EL6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PDCD4Q53EL6 C11orf96-202ENST00000528572 1834 ntBASIC21.27■□□□□ 0.99
PDCD4Q53EL6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.27■□□□□ 0.99
PDCD4Q53EL6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.27■□□□□ 0.99
PDCD4Q53EL6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD4Q53EL6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD4Q53EL6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms