Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.09■□□□□ 0.65
RPS27AP62979 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS27AP62979 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.08■□□□□ 0.65
RPS27AP62979 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS27AP62979 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RPS27AP62979 DUX4L18-201ENST00000553347 1267 ntBASIC19.08■□□□□ 0.64
RPS27AP62979 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPS27AP62979 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.08■□□□□ 0.64
RPS27AP62979 AC242852.2-201ENST00000615738 1807 ntBASIC19.08■□□□□ 0.64
RPS27AP62979 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.08■□□□□ 0.64
RPS27AP62979 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPS27AP62979 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPS27AP62979 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS27AP62979 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.07■□□□□ 0.64
RPS27AP62979 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS27AP62979 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
RPS27AP62979 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS27AP62979 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RPS27AP62979 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPS27AP62979 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.07■□□□□ 0.64
RPS27AP62979 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.07■□□□□ 0.64
RPS27AP62979 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.07■□□□□ 0.64
RPS27AP62979 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RPS27AP62979 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS27AP62979 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS27AP62979 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS27AP62979 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS27AP62979 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS27AP62979 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.06■□□□□ 0.64
RPS27AP62979 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS27AP62979 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPS27AP62979 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.06■□□□□ 0.64
RPS27AP62979 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS27AP62979 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS27AP62979 AC004448.1-201ENST00000458332 883 ntBASIC19.06■□□□□ 0.64
RPS27AP62979 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPS27AP62979 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS27AP62979 MIR4281-201ENST00000580852 62 ntBASIC19.06■□□□□ 0.64
RPS27AP62979 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RPS27AP62979 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPS27AP62979 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS27AP62979 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RPS27AP62979 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS27AP62979 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS27AP62979 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.05■□□□□ 0.64
RPS27AP62979 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RPS27AP62979 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS27AP62979 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS27AP62979 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPS27AP62979 KRT18P24-201ENST00000344739 1156 ntBASIC19.05■□□□□ 0.64
RPS27AP62979 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS27AP62979 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPS27AP62979 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.04■□□□□ 0.64
RPS27AP62979 AL121603.2-201ENST00000557373 2117 ntBASIC19.04■□□□□ 0.64
RPS27AP62979 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS27AP62979 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS27AP62979 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS27AP62979 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS27AP62979 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RPS27AP62979 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.04■□□□□ 0.64
RPS27AP62979 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.04■□□□□ 0.64
RPS27AP62979 THA1P-201ENST00000590384 1145 ntBASIC19.04■□□□□ 0.64
RPS27AP62979 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.04■□□□□ 0.64
RPS27AP62979 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RPS27AP62979 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS27AP62979 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS27AP62979 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.04■□□□□ 0.64
RPS27AP62979 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RPS27AP62979 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS27AP62979 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS27AP62979 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.04■□□□□ 0.64
RPS27AP62979 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPS27AP62979 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPS27AP62979 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS27AP62979 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.03■□□□□ 0.64
RPS27AP62979 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS27AP62979 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RPS27AP62979 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.03■□□□□ 0.64
RPS27AP62979 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.03■□□□□ 0.64
RPS27AP62979 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.03■□□□□ 0.64
RPS27AP62979 AL353803.4-201ENST00000565882 1934 ntBASIC19.03■□□□□ 0.64
RPS27AP62979 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS27AP62979 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS27AP62979 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS27AP62979 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPS27AP62979 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS27AP62979 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPS27AP62979 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
RPS27AP62979 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPS27AP62979 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPS27AP62979 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPS27AP62979 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RPS27AP62979 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPS27AP62979 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.02■□□□□ 0.64
RPS27AP62979 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPS27AP62979 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPS27AP62979 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
RPS27AP62979 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
RPS27AP62979 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS27AP62979 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms