Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN20P56880 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN20P56880 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN20P56880 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN20P56880 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN20P56880 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.3■□□□□ 0.84
CLDN20P56880 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.3■□□□□ 0.84
CLDN20P56880 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CLDN20P56880 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN20P56880 C17orf82-201ENST00000623772 1530 ntBASIC20.3■□□□□ 0.84
CLDN20P56880 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN20P56880 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN20P56880 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN20P56880 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN20P56880 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CLDN20P56880 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN20P56880 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN20P56880 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CLDN20P56880 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN20P56880 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN20P56880 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN20P56880 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN20P56880 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLDN20P56880 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN20P56880 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CLDN20P56880 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN20P56880 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.29■□□□□ 0.84
CLDN20P56880 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN20P56880 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN20P56880 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN20P56880 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN20P56880 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN20P56880 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN20P56880 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CLDN20P56880 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN20P56880 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.28■□□□□ 0.84
CLDN20P56880 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN20P56880 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.28■□□□□ 0.84
CLDN20P56880 EP400NL-214ENST00000641289 2402 ntBASIC20.28■□□□□ 0.84
CLDN20P56880 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CLDN20P56880 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLDN20P56880 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN20P56880 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN20P56880 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN20P56880 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN20P56880 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN20P56880 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN20P56880 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN20P56880 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN20P56880 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.27■□□□□ 0.84
CLDN20P56880 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CLDN20P56880 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN20P56880 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
CLDN20P56880 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CLDN20P56880 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLDN20P56880 AC096631.2-201ENST00000436136 790 ntBASIC20.26■□□□□ 0.83
CLDN20P56880 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.26■□□□□ 0.83
CLDN20P56880 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN20P56880 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.26■□□□□ 0.83
CLDN20P56880 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN20P56880 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN20P56880 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLDN20P56880 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN20P56880 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN20P56880 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN20P56880 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CLDN20P56880 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN20P56880 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN20P56880 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN20P56880 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN20P56880 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN20P56880 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CLDN20P56880 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN20P56880 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN20P56880 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN20P56880 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN20P56880 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLDN20P56880 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN20P56880 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CLDN20P56880 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN20P56880 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN20P56880 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN20P56880 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN20P56880 AC099791.2-201ENST00000605725 427 ntBASIC20.25■□□□□ 0.83
CLDN20P56880 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN20P56880 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN20P56880 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN20P56880 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.25■□□□□ 0.83
CLDN20P56880 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN20P56880 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CLDN20P56880 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN20P56880 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN20P56880 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN20P56880 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN20P56880 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN20P56880 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN20P56880 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN20P56880 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CLDN20P56880 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN20P56880 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 532.8 ms