Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
WNT3AP56704 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.48■■□□□ 1.19
WNT3AP56704 C1orf229-201ENST00000623686 2258 ntBASIC22.48■■□□□ 1.19
WNT3AP56704 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
WNT3AP56704 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
WNT3AP56704 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
WNT3AP56704 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
WNT3AP56704 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.47■■□□□ 1.19
WNT3AP56704 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
WNT3AP56704 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.47■■□□□ 1.19
WNT3AP56704 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
WNT3AP56704 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.47■■□□□ 1.19
WNT3AP56704 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.47■■□□□ 1.19
WNT3AP56704 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
WNT3AP56704 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.47■■□□□ 1.19
WNT3AP56704 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
WNT3AP56704 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
WNT3AP56704 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
WNT3AP56704 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.47■■□□□ 1.19
WNT3AP56704 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.47■■□□□ 1.19
WNT3AP56704 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
WNT3AP56704 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
WNT3AP56704 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.46■■□□□ 1.19
WNT3AP56704 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.46■■□□□ 1.19
WNT3AP56704 AC241377.3-202ENST00000626088 1088 ntBASIC22.46■■□□□ 1.19
WNT3AP56704 AC241585.3-202ENST00000628937 1088 ntBASIC22.46■■□□□ 1.19
WNT3AP56704 AC245100.8-202ENST00000629247 1058 ntBASIC22.46■■□□□ 1.19
WNT3AP56704 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
WNT3AP56704 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
WNT3AP56704 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.46■■□□□ 1.19
WNT3AP56704 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.46■■□□□ 1.19
WNT3AP56704 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
WNT3AP56704 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
WNT3AP56704 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.45■■□□□ 1.18
WNT3AP56704 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.45■■□□□ 1.18
WNT3AP56704 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.45■■□□□ 1.18
WNT3AP56704 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
WNT3AP56704 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
WNT3AP56704 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.45■■□□□ 1.18
WNT3AP56704 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.45■■□□□ 1.18
WNT3AP56704 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.45■■□□□ 1.18
WNT3AP56704 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
WNT3AP56704 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
WNT3AP56704 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.44■■□□□ 1.18
WNT3AP56704 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
WNT3AP56704 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.44■■□□□ 1.18
WNT3AP56704 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.44■■□□□ 1.18
WNT3AP56704 MIR4466-201ENST00000606121 54 ntBASIC22.44■■□□□ 1.18
WNT3AP56704 AC009086.3-201ENST00000623486 1008 ntBASIC22.44■■□□□ 1.18
WNT3AP56704 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
WNT3AP56704 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
WNT3AP56704 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
WNT3AP56704 SRD5A1P1-201ENST00000442297 786 ntBASIC22.43■■□□□ 1.18
WNT3AP56704 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.43■■□□□ 1.18
WNT3AP56704 AC131281.2-201ENST00000520478 145 ntBASIC22.43■■□□□ 1.18
WNT3AP56704 AC099791.2-201ENST00000605725 427 ntBASIC22.43■■□□□ 1.18
WNT3AP56704 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
WNT3AP56704 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
WNT3AP56704 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
WNT3AP56704 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
WNT3AP56704 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.42■■□□□ 1.18
WNT3AP56704 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
WNT3AP56704 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.42■■□□□ 1.18
WNT3AP56704 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
WNT3AP56704 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
WNT3AP56704 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
WNT3AP56704 AC006455.2-201ENST00000429931 906 ntBASIC22.42■■□□□ 1.18
WNT3AP56704 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.42■■□□□ 1.18
WNT3AP56704 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.42■■□□□ 1.18
WNT3AP56704 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
WNT3AP56704 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.42■■□□□ 1.18
WNT3AP56704 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
WNT3AP56704 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
WNT3AP56704 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
WNT3AP56704 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
WNT3AP56704 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.41■■□□□ 1.18
WNT3AP56704 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
WNT3AP56704 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
WNT3AP56704 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
WNT3AP56704 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
WNT3AP56704 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.41■■□□□ 1.18
WNT3AP56704 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
WNT3AP56704 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
WNT3AP56704 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
WNT3AP56704 AC131212.1-201ENST00000613771 668 ntBASIC22.41■■□□□ 1.18
WNT3AP56704 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.41■■□□□ 1.18
WNT3AP56704 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
WNT3AP56704 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
WNT3AP56704 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.41■■□□□ 1.18
WNT3AP56704 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
WNT3AP56704 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
WNT3AP56704 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
WNT3AP56704 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.4■■□□□ 1.18
WNT3AP56704 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
WNT3AP56704 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
WNT3AP56704 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.4■■□□□ 1.18
WNT3AP56704 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
WNT3AP56704 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
WNT3AP56704 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
WNT3AP56704 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms