Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SMSP52788 AC135279.3-201ENST00000610945 1311 ntBASIC20.71■□□□□ 0.91
SMSP52788 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.71■□□□□ 0.91
SMSP52788 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
SMSP52788 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMSP52788 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMSP52788 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMSP52788 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.7■□□□□ 0.9
SMSP52788 AC092666.2-201ENST00000613287 246 ntBASIC20.7■□□□□ 0.9
SMSP52788 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.7■□□□□ 0.9
SMSP52788 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
SMSP52788 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMSP52788 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMSP52788 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMSP52788 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
SMSP52788 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMSP52788 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMSP52788 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMSP52788 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMSP52788 EDA-201ENST00000338901 1233 ntBASIC20.69■□□□□ 0.9
SMSP52788 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SMSP52788 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SMSP52788 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.69■□□□□ 0.9
SMSP52788 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.69■□□□□ 0.9
SMSP52788 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.69■□□□□ 0.9
SMSP52788 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMSP52788 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMSP52788 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SMSP52788 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMSP52788 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMSP52788 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMSP52788 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.68■□□□□ 0.9
SMSP52788 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.68■□□□□ 0.9
SMSP52788 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.68■□□□□ 0.9
SMSP52788 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.68■□□□□ 0.9
SMSP52788 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.68■□□□□ 0.9
SMSP52788 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMSP52788 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMSP52788 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMSP52788 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMSP52788 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMSP52788 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMSP52788 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMSP52788 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMSP52788 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SMSP52788 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMSP52788 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.67■□□□□ 0.9
SMSP52788 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.67■□□□□ 0.9
SMSP52788 AL355001.2-201ENST00000620617 1191 ntBASIC20.67■□□□□ 0.9
SMSP52788 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMSP52788 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SMSP52788 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMSP52788 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMSP52788 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMSP52788 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
SMSP52788 MIR5787-201ENST00000611784 55 ntBASIC20.66■□□□□ 0.9
SMSP52788 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMSP52788 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMSP52788 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMSP52788 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SMSP52788 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMSP52788 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMSP52788 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMSP52788 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SMSP52788 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMSP52788 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.65■□□□□ 0.9
SMSP52788 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMSP52788 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.65■□□□□ 0.9
SMSP52788 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.65■□□□□ 0.9
SMSP52788 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMSP52788 SUDS3P1-201ENST00000505831 966 ntBASIC20.65■□□□□ 0.9
SMSP52788 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMSP52788 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SMSP52788 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMSP52788 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.65■□□□□ 0.9
SMSP52788 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SMSP52788 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SMSP52788 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SMSP52788 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMSP52788 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.64■□□□□ 0.89
SMSP52788 C1orf229-201ENST00000623686 2258 ntBASIC20.64■□□□□ 0.89
SMSP52788 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMSP52788 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMSP52788 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMSP52788 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.64■□□□□ 0.89
SMSP52788 DUX4L19-201ENST00000557448 1267 ntBASIC20.64■□□□□ 0.89
SMSP52788 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMSP52788 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMSP52788 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.64■□□□□ 0.89
SMSP52788 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SMSP52788 AL022069.1-201ENST00000568025 1636 ntBASIC20.64■□□□□ 0.89
SMSP52788 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SMSP52788 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMSP52788 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMSP52788 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.63■□□□□ 0.89
SMSP52788 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SMSP52788 CLDN5-201ENST00000403084 2357 ntBASIC20.63■□□□□ 0.89
SMSP52788 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMSP52788 AC024257.2-201ENST00000549699 147 ntBASIC20.63■□□□□ 0.89
SMSP52788 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms