Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK1P49759 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLK1P49759 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLK1P49759 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.69■□□□□ 0.9
CLK1P49759 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.69■□□□□ 0.9
CLK1P49759 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLK1P49759 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK1P49759 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.69■□□□□ 0.9
CLK1P49759 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.69■□□□□ 0.9
CLK1P49759 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CLK1P49759 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK1P49759 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.69■□□□□ 0.9
CLK1P49759 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLK1P49759 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK1P49759 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK1P49759 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK1P49759 GUSBP5-202ENST00000510805 1989 ntBASIC20.68■□□□□ 0.9
CLK1P49759 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK1P49759 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.68■□□□□ 0.9
CLK1P49759 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLK1P49759 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLK1P49759 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK1P49759 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK1P49759 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.68■□□□□ 0.9
CLK1P49759 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLK1P49759 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.68■□□□□ 0.9
CLK1P49759 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK1P49759 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.68■□□□□ 0.9
CLK1P49759 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK1P49759 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK1P49759 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK1P49759 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK1P49759 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK1P49759 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.68■□□□□ 0.9
CLK1P49759 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK1P49759 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK1P49759 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CLK1P49759 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLK1P49759 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK1P49759 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.67■□□□□ 0.9
CLK1P49759 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK1P49759 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLK1P49759 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK1P49759 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK1P49759 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK1P49759 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK1P49759 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CLK1P49759 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.66■□□□□ 0.9
CLK1P49759 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.66■□□□□ 0.9
CLK1P49759 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLK1P49759 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK1P49759 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK1P49759 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK1P49759 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLK1P49759 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.66■□□□□ 0.9
CLK1P49759 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK1P49759 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.65■□□□□ 0.9
CLK1P49759 AC007375.3-201ENST00000600936 2314 ntBASIC20.65■□□□□ 0.9
CLK1P49759 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLK1P49759 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLK1P49759 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLK1P49759 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CLK1P49759 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLK1P49759 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.65■□□□□ 0.9
CLK1P49759 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.65■□□□□ 0.9
CLK1P49759 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLK1P49759 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.65■□□□□ 0.9
CLK1P49759 SNX5-217ENST00000606557 1087 ntBASIC20.65■□□□□ 0.9
CLK1P49759 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLK1P49759 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLK1P49759 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLK1P49759 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLK1P49759 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.64■□□□□ 0.9
CLK1P49759 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.64■□□□□ 0.9
CLK1P49759 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLK1P49759 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.64■□□□□ 0.9
CLK1P49759 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CLK1P49759 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLK1P49759 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CLK1P49759 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLK1P49759 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.64■□□□□ 0.89
CLK1P49759 AC239859.2-201ENST00000444165 318 ntBASIC20.64■□□□□ 0.89
CLK1P49759 MIR4787-201ENST00000607364 84 ntBASIC20.64■□□□□ 0.89
CLK1P49759 AC092028.1-203ENST00000608262 953 ntBASIC20.64■□□□□ 0.89
CLK1P49759 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.64■□□□□ 0.89
CLK1P49759 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK1P49759 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CLK1P49759 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.64■□□□□ 0.89
CLK1P49759 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLK1P49759 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK1P49759 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK1P49759 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK1P49759 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.64■□□□□ 0.89
CLK1P49759 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK1P49759 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK1P49759 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK1P49759 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.63■□□□□ 0.89
CLK1P49759 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK1P49759 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK1P49759 AL035685.1-201ENST00000636663 812 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms