Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.02□□□□□ -0.17
UBE2AP49459 AC103724.3-201ENST00000564481 992 ntBASIC14.02□□□□□ -0.17
UBE2AP49459 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.02□□□□□ -0.17
UBE2AP49459 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2AP49459 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
UBE2AP49459 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC14.02□□□□□ -0.17
UBE2AP49459 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2AP49459 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC14.01□□□□□ -0.17
UBE2AP49459 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2AP49459 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2AP49459 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2AP49459 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2AP49459 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2AP49459 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2AP49459 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2AP49459 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.01□□□□□ -0.17
UBE2AP49459 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2AP49459 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.01□□□□□ -0.17
UBE2AP49459 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UBE2AP49459 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2AP49459 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2AP49459 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
UBE2AP49459 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.01□□□□□ -0.17
UBE2AP49459 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
UBE2AP49459 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UBE2AP49459 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2AP49459 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UBE2AP49459 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2AP49459 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2AP49459 EI24-204ENST00000527235 1625 ntTSL 5 BASIC14.01□□□□□ -0.17
UBE2AP49459 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14□□□□□ -0.17
UBE2AP49459 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC14□□□□□ -0.17
UBE2AP49459 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
UBE2AP49459 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 ANOS2P-203ENST00000472227 1816 ntBASIC14□□□□□ -0.17
UBE2AP49459 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 BX664725.1-201ENST00000438252 379 ntBASIC14□□□□□ -0.17
UBE2AP49459 AC004448.1-201ENST00000458332 883 ntBASIC14□□□□□ -0.17
UBE2AP49459 AC103834.1-201ENST00000520383 144 ntBASIC14□□□□□ -0.17
UBE2AP49459 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14□□□□□ -0.17
UBE2AP49459 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14□□□□□ -0.17
UBE2AP49459 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
UBE2AP49459 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC14□□□□□ -0.17
UBE2AP49459 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
UBE2AP49459 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2AP49459 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
UBE2AP49459 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC13.99□□□□□ -0.17
UBE2AP49459 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2AP49459 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2AP49459 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2AP49459 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2AP49459 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
UBE2AP49459 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
UBE2AP49459 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2AP49459 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC13.99□□□□□ -0.17
UBE2AP49459 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2AP49459 NFE2L3P1-201ENST00000588207 1959 ntBASIC13.99□□□□□ -0.17
UBE2AP49459 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2AP49459 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2AP49459 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2AP49459 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2AP49459 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2AP49459 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC13.98□□□□□ -0.17
UBE2AP49459 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2AP49459 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2AP49459 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2AP49459 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
UBE2AP49459 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC13.98□□□□□ -0.17
UBE2AP49459 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2AP49459 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC13.98□□□□□ -0.17
UBE2AP49459 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UBE2AP49459 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2AP49459 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2AP49459 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2AP49459 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UBE2AP49459 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2AP49459 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC13.98□□□□□ -0.17
UBE2AP49459 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2AP49459 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2AP49459 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
UBE2AP49459 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2AP49459 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
UBE2AP49459 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2AP49459 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2AP49459 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
UBE2AP49459 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2AP49459 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms