Protein–RNA interactions for Protein: P47898

HTR5A, 5-hydroxytryptamine receptor 5A, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR5AP47898 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HTR5AP47898 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HTR5AP47898 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HTR5AP47898 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HTR5AP47898 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.48■□□□□ 0.71
HTR5AP47898 AL117332.1-201ENST00000622628 974 ntBASIC19.48■□□□□ 0.71
HTR5AP47898 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HTR5AP47898 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HTR5AP47898 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.48■□□□□ 0.71
HTR5AP47898 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.48■□□□□ 0.71
HTR5AP47898 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR5AP47898 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.47■□□□□ 0.71
HTR5AP47898 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HTR5AP47898 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HTR5AP47898 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR5AP47898 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR5AP47898 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
HTR5AP47898 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR5AP47898 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HTR5AP47898 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR5AP47898 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR5AP47898 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR5AP47898 LINC01529-204ENST00000636474 1715 ntBASIC19.46■□□□□ 0.71
HTR5AP47898 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.46■□□□□ 0.71
HTR5AP47898 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.46■□□□□ 0.71
HTR5AP47898 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HTR5AP47898 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.46■□□□□ 0.71
HTR5AP47898 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR5AP47898 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.46■□□□□ 0.71
HTR5AP47898 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTR5AP47898 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.45■□□□□ 0.7
HTR5AP47898 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTR5AP47898 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTR5AP47898 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HTR5AP47898 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HTR5AP47898 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.45■□□□□ 0.7
HTR5AP47898 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HTR5AP47898 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.44■□□□□ 0.7
HTR5AP47898 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTR5AP47898 FP325331.1-202ENST00000623531 1380 ntBASIC19.44■□□□□ 0.7
HTR5AP47898 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.44■□□□□ 0.7
HTR5AP47898 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR5AP47898 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR5AP47898 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR5AP47898 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR5AP47898 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTR5AP47898 MIR3621-201ENST00000580529 85 ntBASIC19.44■□□□□ 0.7
HTR5AP47898 C17orf82-201ENST00000623772 1530 ntBASIC19.44■□□□□ 0.7
HTR5AP47898 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR5AP47898 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR5AP47898 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR5AP47898 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR5AP47898 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR5AP47898 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR5AP47898 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HTR5AP47898 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTR5AP47898 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HTR5AP47898 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTR5AP47898 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTR5AP47898 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
HTR5AP47898 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.43■□□□□ 0.7
HTR5AP47898 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.43■□□□□ 0.7
HTR5AP47898 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HTR5AP47898 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.43■□□□□ 0.7
HTR5AP47898 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTR5AP47898 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
HTR5AP47898 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.42■□□□□ 0.7
HTR5AP47898 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTR5AP47898 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTR5AP47898 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HTR5AP47898 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTR5AP47898 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTR5AP47898 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
HTR5AP47898 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTR5AP47898 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTR5AP47898 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.42■□□□□ 0.7
HTR5AP47898 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.42■□□□□ 0.7
HTR5AP47898 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.42■□□□□ 0.7
HTR5AP47898 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTR5AP47898 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTR5AP47898 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTR5AP47898 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.41■□□□□ 0.7
HTR5AP47898 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HTR5AP47898 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HTR5AP47898 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HTR5AP47898 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HTR5AP47898 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR5AP47898 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTR5AP47898 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR5AP47898 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR5AP47898 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR5AP47898 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR5AP47898 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.4■□□□□ 0.7
HTR5AP47898 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.4■□□□□ 0.7
HTR5AP47898 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.4■□□□□ 0.7
HTR5AP47898 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR5AP47898 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR5AP47898 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTR5AP47898 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR5AP47898 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms