Protein–RNA interactions for Protein: P47099

TY1A-JR2, Transposon Ty1-JR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-JR2P47099 YJL009WYJL009W 327 nt6.73□□□□□ -1.33
TY1A-JR2P47099 YJL169WYJL169W 369 nt6.73□□□□□ -1.33
TY1A-JR2P47099 TFS1YLR178C 660 nt6.73□□□□□ -1.33
TY1A-JR2P47099 TOM22YNL131W 459 nt6.73□□□□□ -1.33
TY1A-JR2P47099 RPA49YNL248C 1248 nt6.73□□□□□ -1.33
TY1A-JR2P47099 TMA16YOR252W 537 nt6.73□□□□□ -1.33
TY1A-JR2P47099 RBL2YOR265W 321 nt6.73□□□□□ -1.33
TY1A-JR2P47099 SNU66YOR308C 1764 nt6.72□□□□□ -1.33
TY1A-JR2P47099 SSC1YJR045C 1965 nt6.72□□□□□ -1.33
TY1A-JR2P47099 YER079WYER079W 633 nt6.72□□□□□ -1.33
TY1A-JR2P47099 LCB3YJL134W 1230 nt6.72□□□□□ -1.33
TY1A-JR2P47099 ELP6YMR312W 822 nt6.72□□□□□ -1.33
TY1A-JR2P47099 ATG8YBL078C 354 nt6.72□□□□□ -1.33
TY1A-JR2P47099 ICY2YPL250C 411 nt6.72□□□□□ -1.33
TY1A-JR2P47099 BMT2YBR141C 1014 nt6.72□□□□□ -1.33
TY1A-JR2P47099 STP22YCL008C 1158 nt6.72□□□□□ -1.33
TY1A-JR2P47099 SUC2YIL162W 1599 nt6.71□□□□□ -1.34
TY1A-JR2P47099 YER087C-AYER087C-A 552 nt6.71□□□□□ -1.34
TY1A-JR2P47099 YER145C-AYER145C-A 438 nt6.71□□□□□ -1.34
TY1A-JR2P47099 TMT1YER175C 900 nt6.71□□□□□ -1.34
TY1A-JR2P47099 SPS100YHR139C 981 nt6.71□□□□□ -1.34
TY1A-JR2P47099 YAL068W-AYAL068W-A 255 nt6.71□□□□□ -1.34
TY1A-JR2P47099 RPL15BYMR121C 615 nt6.71□□□□□ -1.34
TY1A-JR2P47099 BRX1YOL077C 876 nt6.71□□□□□ -1.34
TY1A-JR2P47099 SYC1YOR179C 567 nt6.71□□□□□ -1.34
TY1A-JR2P47099 SRP54YPR088C 1626 nt6.71□□□□□ -1.34
TY1A-JR2P47099 AVL9YLR114C 2295 nt6.7□□□□□ -1.34
TY1A-JR2P47099 YCL075WYCL075W 441 nt6.7□□□□□ -1.34
TY1A-JR2P47099 RXT3YDL076C 885 nt6.7□□□□□ -1.34
TY1A-JR2P47099 HUR1YGL168W 333 nt6.7□□□□□ -1.34
TY1A-JR2P47099 YLR171WYLR171W 390 nt6.7□□□□□ -1.34
TY1A-JR2P47099 TSA1YML028W 591 nt6.7□□□□□ -1.34
TY1A-JR2P47099 YMR031W-AYMR031W-A 327 nt6.7□□□□□ -1.34
TY1A-JR2P47099 SNU56YDR240C 1479 nt6.7□□□□□ -1.34
TY1A-JR2P47099 CUE2YKL090W 1332 nt6.7□□□□□ -1.34
TY1A-JR2P47099 TCM62YBR044C 1719 nt6.7□□□□□ -1.34
TY1A-JR2P47099 ISN1YOR155C 1353 nt6.69□□□□□ -1.34
TY1A-JR2P47099 SLY41YOR307C 1362 nt6.69□□□□□ -1.34
TY1A-JR2P47099 ACA1YER045C 1470 nt6.69□□□□□ -1.34
TY1A-JR2P47099 APE4YHR113W 1473 nt6.69□□□□□ -1.34
TY1A-JR2P47099 AAD3YCR107W 1092 nt6.69□□□□□ -1.34
TY1A-JR2P47099 IZH1YDR492W 951 nt6.69□□□□□ -1.34
TY1A-JR2P47099 YDR535CYDR535C 501 nt6.69□□□□□ -1.34
TY1A-JR2P47099 tM(CAU)Q1tM(CAU)Q1 76 nt6.69□□□□□ -1.34
TY1A-JR2P47099 YGR039WYGR039W 312 nt6.69□□□□□ -1.34
TY1A-JR2P47099 YHR138CYHR138C 345 nt6.69□□□□□ -1.34
TY1A-JR2P47099 DAL3YIR032C 588 nt6.69□□□□□ -1.34
TY1A-JR2P47099 ICS3YJL077C 396 nt6.69□□□□□ -1.34
TY1A-JR2P47099 HOC1YJR075W 1191 nt6.69□□□□□ -1.34
TY1A-JR2P47099 YJR087WYJR087W 351 nt6.69□□□□□ -1.34
TY1A-JR2P47099 APS1YLR170C 471 nt6.69□□□□□ -1.34
TY1A-JR2P47099 LSP1YPL004C 1026 nt6.69□□□□□ -1.34
TY1A-JR2P47099 OPY1YBR129C 987 nt6.69□□□□□ -1.34
TY1A-JR2P47099 FET3YMR058W 1911 nt6.69□□□□□ -1.34
TY1A-JR2P47099 URA7YBL039C 1740 nt6.68□□□□□ -1.34
TY1A-JR2P47099 YDL023CYDL023C 321 nt6.68□□□□□ -1.34
TY1A-JR2P47099 YDR391CYDR391C 699 nt6.68□□□□□ -1.34
TY1A-JR2P47099 YHR130CYHR130C 336 nt6.68□□□□□ -1.34
TY1A-JR2P47099 YLR125WYLR125W 411 nt6.68□□□□□ -1.34
TY1A-JR2P47099 YMR086C-AYMR086C-A 339 nt6.68□□□□□ -1.34
TY1A-JR2P47099 YOL159CYOL159C 516 nt6.68□□□□□ -1.34
TY1A-JR2P47099 YOR041CYOR041C 432 nt6.68□□□□□ -1.34
TY1A-JR2P47099 SLF1YDR515W 1344 nt6.68□□□□□ -1.34
TY1A-JR2P47099 EMP46YLR080W 1335 nt6.68□□□□□ -1.34
TY1A-JR2P47099 TBF1YPL128C 1689 nt6.68□□□□□ -1.34
TY1A-JR2P47099 PUG1YER185W 912 nt6.67□□□□□ -1.34
TY1A-JR2P47099 LOC1YFR001W 615 nt6.67□□□□□ -1.34
TY1A-JR2P47099 VPS51YKR020W 495 nt6.67□□□□□ -1.34
TY1A-JR2P47099 YLR224WYLR224W 1110 nt6.67□□□□□ -1.34
TY1A-JR2P47099 YMR130WYMR130W 909 nt6.67□□□□□ -1.34
TY1A-JR2P47099 snR41snR41 95 nt6.67□□□□□ -1.34
TY1A-JR2P47099 YDL071CYDL071C 375 nt6.66□□□□□ -1.34
TY1A-JR2P47099 PPZ2YDR436W 2133 nt6.66□□□□□ -1.34
TY1A-JR2P47099 CKB1YGL019W 837 nt6.66□□□□□ -1.34
TY1A-JR2P47099 YGR068W-AYGR068W-A 96 nt6.66□□□□□ -1.34
TY1A-JR2P47099 YGR073CYGR073C 372 nt6.66□□□□□ -1.34
TY1A-JR2P47099 Q0143Q0143 153 nt6.66□□□□□ -1.34
TY1A-JR2P47099 MAM33YIL070C 801 nt6.66□□□□□ -1.34
TY1A-JR2P47099 YIL175WYIL175W 318 nt6.66□□□□□ -1.34
TY1A-JR2P47099 RIB2YOL066C 1776 nt6.66□□□□□ -1.34
TY1A-JR2P47099 NUP49YGL172W 1419 nt6.66□□□□□ -1.34
TY1A-JR2P47099 IXR1YKL032C 1794 nt6.65□□□□□ -1.34
TY1A-JR2P47099 RIM1YCR028C-A 408 nt6.65□□□□□ -1.34
TY1A-JR2P47099 GNA1YFL017C 480 nt6.65□□□□□ -1.34
TY1A-JR2P47099 IES3YLR052W 753 nt6.65□□□□□ -1.34
TY1A-JR2P47099 YLR463CYLR463C 552 nt6.65□□□□□ -1.34
TY1A-JR2P47099 UBX4YMR067C 1251 nt6.65□□□□□ -1.34
TY1A-JR2P47099 YNR001W-AYNR001W-A 219 nt6.65□□□□□ -1.34
TY1A-JR2P47099 ECM33YBR078W 1290 nt6.65□□□□□ -1.34
TY1A-JR2P47099 YPR126CYPR126C 309 nt6.65□□□□□ -1.34
TY1A-JR2P47099 ARL1YBR164C 552 nt6.65□□□□□ -1.34
TY1A-JR2P47099 ARP3YJR065C 1350 nt6.65□□□□□ -1.35
TY1A-JR2P47099 HSM3YBR272C 1443 nt6.65□□□□□ -1.35
TY1A-JR2P47099 NOG2YNR053C 1461 nt6.65□□□□□ -1.35
TY1A-JR2P47099 RRP3YHR065C 1506 nt6.65□□□□□ -1.35
TY1A-JR2P47099 GUF1YLR289W 1938 nt6.64□□□□□ -1.35
TY1A-JR2P47099 MRH1YDR033W 963 nt6.64□□□□□ -1.35
TY1A-JR2P47099 YDR445CYDR445C 408 nt6.64□□□□□ -1.35
TY1A-JR2P47099 SLD5YDR489W 885 nt6.64□□□□□ -1.35
TY1A-JR2P47099 YER152W-AYER152W-A 567 nt6.64□□□□□ -1.35
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms