Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR4A2P43354 AC120024.1-201ENST00000562672 995 ntBASIC19.99■□□□□ 0.79
NR4A2P43354 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR4A2P43354 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NR4A2P43354 AL391422.3-201ENST00000603791 2761 ntBASIC19.99■□□□□ 0.79
NR4A2P43354 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.98■□□□□ 0.79
NR4A2P43354 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NR4A2P43354 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR4A2P43354 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.98■□□□□ 0.79
NR4A2P43354 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR4A2P43354 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NR4A2P43354 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.98■□□□□ 0.79
NR4A2P43354 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.98■□□□□ 0.79
NR4A2P43354 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NR4A2P43354 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR4A2P43354 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.98■□□□□ 0.79
NR4A2P43354 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NR4A2P43354 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NR4A2P43354 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR4A2P43354 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
NR4A2P43354 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.97■□□□□ 0.79
NR4A2P43354 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR4A2P43354 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NR4A2P43354 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NR4A2P43354 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR4A2P43354 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR4A2P43354 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR4A2P43354 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR4A2P43354 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR4A2P43354 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.97■□□□□ 0.79
NR4A2P43354 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.97■□□□□ 0.79
NR4A2P43354 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR4A2P43354 AC137630.3-201ENST00000607245 391 ntBASIC19.97■□□□□ 0.79
NR4A2P43354 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR4A2P43354 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR4A2P43354 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
NR4A2P43354 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.97■□□□□ 0.79
NR4A2P43354 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.96■□□□□ 0.79
NR4A2P43354 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR4A2P43354 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NR4A2P43354 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR4A2P43354 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.96■□□□□ 0.79
NR4A2P43354 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NR4A2P43354 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR4A2P43354 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR4A2P43354 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR4A2P43354 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.96■□□□□ 0.79
NR4A2P43354 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.96■□□□□ 0.79
NR4A2P43354 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NR4A2P43354 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NR4A2P43354 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR4A2P43354 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR4A2P43354 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR4A2P43354 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.79
NR4A2P43354 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NR4A2P43354 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR4A2P43354 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NR4A2P43354 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NR4A2P43354 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NR4A2P43354 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.95■□□□□ 0.78
NR4A2P43354 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.95■□□□□ 0.78
NR4A2P43354 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.95■□□□□ 0.78
NR4A2P43354 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NR4A2P43354 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.95■□□□□ 0.78
NR4A2P43354 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR4A2P43354 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NR4A2P43354 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR4A2P43354 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR4A2P43354 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR4A2P43354 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.94■□□□□ 0.78
NR4A2P43354 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NR4A2P43354 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR4A2P43354 GUSBP5-202ENST00000510805 1989 ntBASIC19.94■□□□□ 0.78
NR4A2P43354 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NR4A2P43354 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.94■□□□□ 0.78
NR4A2P43354 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NR4A2P43354 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.94■□□□□ 0.78
NR4A2P43354 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.94■□□□□ 0.78
NR4A2P43354 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR4A2P43354 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NR4A2P43354 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.94■□□□□ 0.78
NR4A2P43354 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
NR4A2P43354 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR4A2P43354 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NR4A2P43354 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR4A2P43354 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR4A2P43354 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.93■□□□□ 0.78
NR4A2P43354 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NR4A2P43354 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NR4A2P43354 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NR4A2P43354 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NR4A2P43354 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NR4A2P43354 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NR4A2P43354 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.93■□□□□ 0.78
NR4A2P43354 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NR4A2P43354 KRT16P3-201ENST00000439127 1283 ntBASIC19.93■□□□□ 0.78
NR4A2P43354 UNC93B8-201ENST00000511903 705 ntBASIC19.93■□□□□ 0.78
NR4A2P43354 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.93■□□□□ 0.78
NR4A2P43354 AC019069.1-201ENST00000610008 1333 ntBASIC19.93■□□□□ 0.78
NR4A2P43354 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms