Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A3P43003 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A3P43003 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A3P43003 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A3P43003 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A3P43003 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SLC1A3P43003 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SLC1A3P43003 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC1A3P43003 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC1A3P43003 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A3P43003 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SLC1A3P43003 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC1A3P43003 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC1A3P43003 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
SLC1A3P43003 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC1A3P43003 AC144652.1-201ENST00000609974 1624 ntBASIC20.39■□□□□ 0.86
SLC1A3P43003 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A3P43003 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SLC1A3P43003 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.39■□□□□ 0.85
SLC1A3P43003 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.39■□□□□ 0.85
SLC1A3P43003 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.39■□□□□ 0.85
SLC1A3P43003 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A3P43003 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A3P43003 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A3P43003 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SLC1A3P43003 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A3P43003 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A3P43003 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A3P43003 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC1A3P43003 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A3P43003 KRT16P3-201ENST00000439127 1283 ntBASIC20.38■□□□□ 0.85
SLC1A3P43003 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC1A3P43003 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SLC1A3P43003 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A3P43003 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A3P43003 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A3P43003 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SLC1A3P43003 AL353803.4-201ENST00000565882 1934 ntBASIC20.37■□□□□ 0.85
SLC1A3P43003 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A3P43003 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A3P43003 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC1A3P43003 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A3P43003 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A3P43003 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SLC1A3P43003 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC1A3P43003 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A3P43003 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC1A3P43003 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC1A3P43003 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
SLC1A3P43003 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A3P43003 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SLC1A3P43003 GUSBP5-202ENST00000510805 1989 ntBASIC20.36■□□□□ 0.85
SLC1A3P43003 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.36■□□□□ 0.85
SLC1A3P43003 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC1A3P43003 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A3P43003 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A3P43003 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC1A3P43003 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC1A3P43003 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A3P43003 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A3P43003 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC1A3P43003 AC009102.2-201ENST00000606772 1639 ntBASIC20.35■□□□□ 0.85
SLC1A3P43003 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A3P43003 LINC00526-201ENST00000581067 1875 ntBASIC20.35■□□□□ 0.85
SLC1A3P43003 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A3P43003 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A3P43003 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A3P43003 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A3P43003 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SLC1A3P43003 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC1A3P43003 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A3P43003 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
SLC1A3P43003 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
SLC1A3P43003 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SLC1A3P43003 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC1A3P43003 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A3P43003 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SLC1A3P43003 FP325331.1-202ENST00000623531 1380 ntBASIC20.34■□□□□ 0.85
SLC1A3P43003 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A3P43003 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A3P43003 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A3P43003 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A3P43003 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC1A3P43003 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.34■□□□□ 0.85
SLC1A3P43003 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A3P43003 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC1A3P43003 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.34■□□□□ 0.85
SLC1A3P43003 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A3P43003 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A3P43003 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A3P43003 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A3P43003 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A3P43003 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A3P43003 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC1A3P43003 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A3P43003 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A3P43003 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC1A3P43003 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.33■□□□□ 0.85
SLC1A3P43003 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC1A3P43003 LINC01529-204ENST00000636474 1715 ntBASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms