Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 MIR4787-201ENST00000607364 84 ntBASIC21.08■□□□□ 0.97
RPL3P39023 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RPL3P39023 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.08■□□□□ 0.96
RPL3P39023 AC127496.7-201ENST00000625110 1798 ntBASIC21.08■□□□□ 0.96
RPL3P39023 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
RPL3P39023 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPL3P39023 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPL3P39023 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPL3P39023 ECEL1P1-201ENST00000373592 1742 ntBASIC21.07■□□□□ 0.96
RPL3P39023 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.07■□□□□ 0.96
RPL3P39023 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
RPL3P39023 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPL3P39023 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPL3P39023 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPL3P39023 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.07■□□□□ 0.96
RPL3P39023 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RPL3P39023 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPL3P39023 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RPL3P39023 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.06■□□□□ 0.96
RPL3P39023 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.06■□□□□ 0.96
RPL3P39023 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.06■□□□□ 0.96
RPL3P39023 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPL3P39023 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.06■□□□□ 0.96
RPL3P39023 AC009086.3-201ENST00000623486 1008 ntBASIC21.06■□□□□ 0.96
RPL3P39023 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.06■□□□□ 0.96
RPL3P39023 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.06■□□□□ 0.96
RPL3P39023 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPL3P39023 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPL3P39023 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPL3P39023 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RPL3P39023 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPL3P39023 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPL3P39023 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPL3P39023 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPL3P39023 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPL3P39023 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPL3P39023 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPL3P39023 RARRES2P1-201ENST00000474487 481 ntBASIC21.05■□□□□ 0.96
RPL3P39023 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.05■□□□□ 0.96
RPL3P39023 DUX4L4-201ENST00000566884 1269 ntBASIC21.05■□□□□ 0.96
RPL3P39023 AC242852.2-201ENST00000615738 1807 ntBASIC21.05■□□□□ 0.96
RPL3P39023 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPL3P39023 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPL3P39023 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPL3P39023 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPL3P39023 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPL3P39023 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL3P39023 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL3P39023 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL3P39023 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL3P39023 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL3P39023 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RPL3P39023 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL3P39023 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPL3P39023 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPL3P39023 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RPL3P39023 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.03■□□□□ 0.96
RPL3P39023 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.03■□□□□ 0.96
RPL3P39023 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPL3P39023 AC239859.2-201ENST00000444165 318 ntBASIC21.03■□□□□ 0.96
RPL3P39023 AC010997.5-201ENST00000609182 354 ntBASIC21.03■□□□□ 0.96
RPL3P39023 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.03■□□□□ 0.96
RPL3P39023 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RPL3P39023 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPL3P39023 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.03■□□□□ 0.96
RPL3P39023 LINC00526-201ENST00000581067 1875 ntBASIC21.03■□□□□ 0.96
RPL3P39023 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPL3P39023 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPL3P39023 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPL3P39023 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPL3P39023 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPL3P39023 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.02■□□□□ 0.96
RPL3P39023 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RPL3P39023 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
RPL3P39023 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RPL3P39023 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RPL3P39023 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RPL3P39023 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPL3P39023 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.01■□□□□ 0.95
RPL3P39023 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.01■□□□□ 0.95
RPL3P39023 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPL3P39023 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPL3P39023 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.01■□□□□ 0.95
RPL3P39023 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.01■□□□□ 0.95
RPL3P39023 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RPL3P39023 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.01■□□□□ 0.95
RPL3P39023 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPL3P39023 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RPL3P39023 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPL3P39023 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPL3P39023 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPL3P39023 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPL3P39023 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPL3P39023 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RPL3P39023 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPL3P39023 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPL3P39023 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21■□□□□ 0.95
RPL3P39023 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RPL3P39023 AC009299.2-201ENST00000482477 511 ntBASIC21■□□□□ 0.95
RPL3P39023 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms