Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.19■□□□□ 0.5
SNCAP37840 AC242852.2-201ENST00000615738 1807 ntBASIC18.19■□□□□ 0.5
SNCAP37840 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SNCAP37840 RARRES2P2-201ENST00000394842 485 ntBASIC18.19■□□□□ 0.5
SNCAP37840 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNCAP37840 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNCAP37840 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
SNCAP37840 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNCAP37840 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.19■□□□□ 0.5
SNCAP37840 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.19■□□□□ 0.5
SNCAP37840 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.19■□□□□ 0.5
SNCAP37840 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNCAP37840 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNCAP37840 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
SNCAP37840 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNCAP37840 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNCAP37840 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SNCAP37840 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNCAP37840 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNCAP37840 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNCAP37840 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNCAP37840 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNCAP37840 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SNCAP37840 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNCAP37840 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.17■□□□□ 0.5
SNCAP37840 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.17■□□□□ 0.5
SNCAP37840 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNCAP37840 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNCAP37840 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.17■□□□□ 0.5
SNCAP37840 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SNCAP37840 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNCAP37840 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SNCAP37840 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNCAP37840 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNCAP37840 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNCAP37840 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SNCAP37840 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SNCAP37840 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.16■□□□□ 0.5
SNCAP37840 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNCAP37840 LONRF2P2-201ENST00000439212 571 ntBASIC18.16■□□□□ 0.5
SNCAP37840 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNCAP37840 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.16■□□□□ 0.5
SNCAP37840 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.16■□□□□ 0.5
SNCAP37840 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNCAP37840 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNCAP37840 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.16■□□□□ 0.5
SNCAP37840 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNCAP37840 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNCAP37840 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNCAP37840 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SNCAP37840 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.15■□□□□ 0.5
SNCAP37840 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNCAP37840 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.15■□□□□ 0.5
SNCAP37840 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.15■□□□□ 0.5
SNCAP37840 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNCAP37840 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNCAP37840 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SNCAP37840 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.15■□□□□ 0.5
SNCAP37840 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNCAP37840 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SNCAP37840 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNCAP37840 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNCAP37840 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.15■□□□□ 0.5
SNCAP37840 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SNCAP37840 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNCAP37840 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNCAP37840 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SNCAP37840 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNCAP37840 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.14■□□□□ 0.49
SNCAP37840 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SNCAP37840 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.14■□□□□ 0.49
SNCAP37840 AC011551.1-201ENST00000614101 683 ntBASIC18.14■□□□□ 0.49
SNCAP37840 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.14■□□□□ 0.49
SNCAP37840 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNCAP37840 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNCAP37840 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNCAP37840 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNCAP37840 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SNCAP37840 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SNCAP37840 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNCAP37840 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SNCAP37840 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNCAP37840 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNCAP37840 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.13■□□□□ 0.49
SNCAP37840 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNCAP37840 AC073130.3-201ENST00000624389 2278 ntBASIC18.13■□□□□ 0.49
SNCAP37840 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNCAP37840 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.13■□□□□ 0.49
SNCAP37840 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.13■□□□□ 0.49
SNCAP37840 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SNCAP37840 U85056.1-201ENST00000616429 682 ntBASIC18.13■□□□□ 0.49
SNCAP37840 AC129492.7-201ENST00000622992 756 ntBASIC18.13■□□□□ 0.49
SNCAP37840 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNCAP37840 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNCAP37840 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNCAP37840 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SNCAP37840 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.13■□□□□ 0.49
SNCAP37840 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.13■□□□□ 0.49
SNCAP37840 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNCAP37840 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms