Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCNN1AP37088 AL136116.3-201ENST00000402907 1138 ntBASIC23.24■■□□□ 1.31
SCNN1AP37088 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.24■■□□□ 1.31
SCNN1AP37088 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.24■■□□□ 1.31
SCNN1AP37088 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.24■■□□□ 1.31
SCNN1AP37088 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.24■■□□□ 1.31
SCNN1AP37088 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCNN1AP37088 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCNN1AP37088 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.24■■□□□ 1.31
SCNN1AP37088 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCNN1AP37088 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.23■■□□□ 1.31
SCNN1AP37088 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
SCNN1AP37088 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCNN1AP37088 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
SCNN1AP37088 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCNN1AP37088 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.22■■□□□ 1.31
SCNN1AP37088 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.22■■□□□ 1.31
SCNN1AP37088 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SCNN1AP37088 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SCNN1AP37088 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.22■■□□□ 1.31
SCNN1AP37088 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCNN1AP37088 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCNN1AP37088 AC068473.5-201ENST00000616428 2072 ntBASIC23.22■■□□□ 1.31
SCNN1AP37088 MIR3181-201ENST00000578512 73 ntBASIC23.22■■□□□ 1.31
SCNN1AP37088 pRNA.6-201ENST00000610482 90 ntBASIC23.22■■□□□ 1.31
SCNN1AP37088 pRNA.5-201ENST00000612139 90 ntBASIC23.22■■□□□ 1.31
SCNN1AP37088 pRNA.11-201ENST00000618423 90 ntBASIC23.22■■□□□ 1.31
SCNN1AP37088 pRNA.13-201ENST00000619112 90 ntBASIC23.22■■□□□ 1.31
SCNN1AP37088 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCNN1AP37088 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SCNN1AP37088 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.22■■□□□ 1.31
SCNN1AP37088 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCNN1AP37088 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.21■■□□□ 1.31
SCNN1AP37088 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SCNN1AP37088 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCNN1AP37088 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCNN1AP37088 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.21■■□□□ 1.31
SCNN1AP37088 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCNN1AP37088 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCNN1AP37088 AC133637.1-201ENST00000624115 1537 ntBASIC23.2■■□□□ 1.3
SCNN1AP37088 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
SCNN1AP37088 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.2■■□□□ 1.3
SCNN1AP37088 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
SCNN1AP37088 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
SCNN1AP37088 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCNN1AP37088 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCNN1AP37088 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCNN1AP37088 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SCNN1AP37088 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SCNN1AP37088 SYT6-210ENST00000641643 1587 ntBASIC23.19■■□□□ 1.3
SCNN1AP37088 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.19■■□□□ 1.3
SCNN1AP37088 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SCNN1AP37088 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SCNN1AP37088 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCNN1AP37088 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.18■■□□□ 1.3
SCNN1AP37088 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SCNN1AP37088 AC012676.1-201ENST00000574705 1949 ntBASIC23.18■■□□□ 1.3
SCNN1AP37088 AC008406.3-201ENST00000620001 1374 ntBASIC23.18■■□□□ 1.3
SCNN1AP37088 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCNN1AP37088 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.18■■□□□ 1.3
SCNN1AP37088 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.18■■□□□ 1.3
SCNN1AP37088 AC011298.3-201ENST00000615796 283 ntBASIC23.18■■□□□ 1.3
SCNN1AP37088 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SCNN1AP37088 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCNN1AP37088 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.18■■□□□ 1.3
SCNN1AP37088 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.18■■□□□ 1.3
SCNN1AP37088 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.18■■□□□ 1.3
SCNN1AP37088 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCNN1AP37088 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCNN1AP37088 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCNN1AP37088 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SCNN1AP37088 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SCNN1AP37088 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.17■■□□□ 1.3
SCNN1AP37088 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SCNN1AP37088 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SCNN1AP37088 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.17■■□□□ 1.3
SCNN1AP37088 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCNN1AP37088 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCNN1AP37088 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SCNN1AP37088 SERBP1P1-201ENST00000396021 1160 ntBASIC23.17■■□□□ 1.3
SCNN1AP37088 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SCNN1AP37088 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.17■■□□□ 1.3
SCNN1AP37088 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.17■■□□□ 1.3
SCNN1AP37088 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.17■■□□□ 1.3
SCNN1AP37088 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCNN1AP37088 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCNN1AP37088 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SCNN1AP37088 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCNN1AP37088 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SCNN1AP37088 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SCNN1AP37088 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCNN1AP37088 AC004687.1-201ENST00000579003 1625 ntBASIC23.16■■□□□ 1.3
SCNN1AP37088 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SCNN1AP37088 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.16■■□□□ 1.3
SCNN1AP37088 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.16■■□□□ 1.3
SCNN1AP37088 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.16■■□□□ 1.3
SCNN1AP37088 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.16■■□□□ 1.3
SCNN1AP37088 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCNN1AP37088 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCNN1AP37088 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms