Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PTPN6P29350 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPN6P29350 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PTPN6P29350 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
PTPN6P29350 AL356441.2-201ENST00000443009 864 ntBASIC21.11■□□□□ 0.97
PTPN6P29350 SNX5-217ENST00000606557 1087 ntBASIC21.11■□□□□ 0.97
PTPN6P29350 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PTPN6P29350 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.11■□□□□ 0.97
PTPN6P29350 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.11■□□□□ 0.97
PTPN6P29350 AC242852.2-201ENST00000615738 1807 ntBASIC21.11■□□□□ 0.97
PTPN6P29350 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN6P29350 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PTPN6P29350 TSPY9P-201ENST00000440215 945 ntBASIC21.1■□□□□ 0.97
PTPN6P29350 TSPY11P-201ENST00000442607 1045 ntBASIC21.1■□□□□ 0.97
PTPN6P29350 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PTPN6P29350 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.1■□□□□ 0.97
PTPN6P29350 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.1■□□□□ 0.97
PTPN6P29350 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PTPN6P29350 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN6P29350 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN6P29350 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN6P29350 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
PTPN6P29350 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.09■□□□□ 0.97
PTPN6P29350 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN6P29350 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
PTPN6P29350 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.09■□□□□ 0.97
PTPN6P29350 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN6P29350 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PTPN6P29350 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN6P29350 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN6P29350 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.09■□□□□ 0.97
PTPN6P29350 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN6P29350 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.08■□□□□ 0.97
PTPN6P29350 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN6P29350 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.08■□□□□ 0.97
PTPN6P29350 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN6P29350 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN6P29350 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PTPN6P29350 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN6P29350 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PTPN6P29350 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.08■□□□□ 0.97
PTPN6P29350 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN6P29350 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN6P29350 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTPN6P29350 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTPN6P29350 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTPN6P29350 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PTPN6P29350 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN6P29350 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.07■□□□□ 0.96
PTPN6P29350 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.07■□□□□ 0.96
PTPN6P29350 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.07■□□□□ 0.96
PTPN6P29350 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN6P29350 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN6P29350 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN6P29350 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN6P29350 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN6P29350 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN6P29350 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN6P29350 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PTPN6P29350 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PTPN6P29350 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PTPN6P29350 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPN6P29350 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN6P29350 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN6P29350 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
PTPN6P29350 KRT16P3-201ENST00000439127 1283 ntBASIC21.06■□□□□ 0.96
PTPN6P29350 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.06■□□□□ 0.96
PTPN6P29350 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPN6P29350 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN6P29350 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN6P29350 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN6P29350 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN6P29350 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.06■□□□□ 0.96
PTPN6P29350 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PTPN6P29350 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPN6P29350 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN6P29350 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN6P29350 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PTPN6P29350 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
PTPN6P29350 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PTPN6P29350 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN6P29350 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN6P29350 AC139530.1-201ENST00000575312 1977 ntBASIC21.05■□□□□ 0.96
PTPN6P29350 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN6P29350 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PTPN6P29350 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN6P29350 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN6P29350 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN6P29350 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms